8PYI | pdb_00008pyi

Human IGF1R with inhibitor 6

PDB DOI: https://doi.org/10.2210/pdb8PYI/pdb

Classification: TRANSFERASE
Organism(s): Homo sapiens
Expression System: Spodoptera frugiperda
Mutation(s): No

Deposited: 2023-07-25 Released: 2023-09-20
Deposition Author(s): Dreyer, M.K., Wang, J., Elkins, J.M.
Funding Organization(s): Innovative Medicines Initiative

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.06 Å
R-Value Free:
0.235 (Depositor), 0.236 (DCC)
R-Value Work:
0.191 (Depositor), 0.195 (DCC)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

Ligand Structure Quality Assessment

This is version 1.0 of the entry. See complete history.

Literature

Human IGF1R with inhibitor 6

Dreyer, M.K., Wang, J., Elkins, J.M.

To be published.

Macromolecule Content

Total Structure Weight: 297.6 kDa
Atom Count: 18,860
Modeled Residue Count: 2,289
Deposited Residue Count: 2,568
Unique protein chains: 1

Macromolecules

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| 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Insulin-like growth factor 1 receptor beta chain	A [auth AAA] B [auth BBB] C [auth CCC] D [auth DDD] E [auth EEE] A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth EEE], F [auth FFF], G [auth GGG], H [auth HHH]	321	Homo sapiens	Mutation(s): 0 Gene Names: IGF1R EC: 2.7.10.1
UniProt & NIH Common Fund Data Resources
Find proteins for P08069 (Homo sapiens) Explore P08069 Go to UniProtKB: P08069
PHAROS: P08069 GTEx: ENSG00000140443
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P08069
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
IER (Subject of Investigation/LOI) Query on IER Download:Ideal Coordinates CCD File SDF format, chain I [auth AAA] SDF format, chain K [auth CCC] SDF format, chain L [auth DDD] SDF format, chain M [auth EEE] SDF format, chain P [auth HHH] SDF format, chain O [auth GGG] SDF format, chain N [auth FFF] SDF format, chain J [auth BBB] MOL2 format, chain I [auth AAA] MOL2 format, chain K [auth CCC] MOL2 format, chain L [auth DDD] MOL2 format, chain M [auth EEE] MOL2 format, chain P [auth HHH] MOL2 format, chain O [auth GGG] MOL2 format, chain N [auth FFF] MOL2 format, chain J [auth BBB] mmCIF format, chain I [auth AAA] mmCIF format, chain K [auth CCC] mmCIF format, chain L [auth DDD] mmCIF format, chain M [auth EEE] mmCIF format, chain P [auth HHH] mmCIF format, chain O [auth GGG] mmCIF format, chain N [auth FFF] mmCIF format, chain J [auth BBB]	I [auth AAA] J [auth BBB] K [auth CCC] L [auth DDD] M [auth EEE] I [auth AAA], J [auth BBB], K [auth CCC], L [auth DDD], M [auth EEE], N [auth FFF], O [auth GGG], P [auth HHH]	3-[8-azanyl-1-(4-ethoxy-8-fluoranyl-2-phenyl-quinolin-7-yl)imidazo[1,5-a]pyrazin-3-yl]-1-methyl-cyclobutan-1-ol C₂₈ H₂₆ F N₅ O₂ TVXAIWDTRFFVCZ-OOTKOPMESA-N		Interactions Focus chain I [auth AAA] Focus chain J [auth BBB] Focus chain K [auth CCC] Focus chain L [auth DDD] Focus chain M [auth EEE] Focus chain N [auth FFF] Focus chain O [auth GGG] Focus chain P [auth HHH] Interactions & Density Focus chain I [auth AAA] Focus chain J [auth BBB] Focus chain K [auth CCC] Focus chain L [auth DDD] Focus chain M [auth EEE] Focus chain N [auth FFF] Focus chain O [auth GGG] Focus chain P [auth HHH]