Broad sialic acid usage amongst species D human adenovirus
Mundy, R.M., Baker, A.T., Bates, E.A., Cunliffe, T.G., Teijeira-Crespo, A., Moses, E., Rizkallah, P.J., Parker, A.L.(2023) Npj Viruses 1: 1
Experimental Data Snapshot
(2023) Npj Viruses 1: 1
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Fiber protein | 189 | Human adenovirus 53 | Mutation(s): 0  Gene Names: L5 | ||
UniProt | |||||
Find proteins for E5RWD1 (Human adenovirus 53) Explore E5RWD1  Go to UniProtKB:  E5RWD1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | E5RWD1 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 5 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SIA Query on SIA | BB [auth L] | N-acetyl-alpha-neuraminic acid C11 H19 N O9 SQVRNKJHWKZAKO-YRMXFSIDSA-N | |||
SLB (Subject of Investigation/LOI) Query on SLB | HA [auth F] | N-acetyl-beta-neuraminic acid C11 H19 N O9 SQVRNKJHWKZAKO-PFQGKNLYSA-N | |||
P4G Query on P4G | AB [auth L] GA [auth F] NA [auth G] OA [auth G] V [auth B] | 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE C8 H18 O3 RRQYJINTUHWNHW-UHFFFAOYSA-N | |||
PEG Query on PEG | BA [auth E] CA [auth E] DA [auth E] FA [auth F] LA [auth G] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
EDO Query on EDO | AA [auth E] EA [auth F] IA [auth G] JA [auth G] KA [auth G] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 93.555 | α = 90 |
b = 60.406 | β = 99.88 |
c = 243.686 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
DIALS | data scaling |
xia2 | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Medical Research Council (MRC, United Kingdom) | United Kingdom | MR/N0137941/1 |
Wellcome Trust | United Kingdom | 517732 |