8OFP

Human adenovirus type 24 fiber-knob protein

• PDB DOI: https://doi.org/10.2210/pdb8OFP/pdb

• Classification: VIRAL PROTEIN
• Organism(s): Human adenovirus 24
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2023-03-16 Released: 2023-09-20 
• Deposition Author(s): Rizkallah, P.J., Parker, A.L., Mundy, R.M., Baker, A.T.
• Funding Organization(s): Medical Research Council (MRC, United Kingdom), Wellcome Trust

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 3.10 Å
• R-Value Free: 0.337 
• R-Value Work: 0.234 
• R-Value Observed: 0.239 

Literature

Broad sialic acid usage amongst species D human adenovirus

Mundy, R.M., Baker, A.T., Bates, E.A., Cunliffe, T.G., Teijeira-Crespo, A., Moses, E., Rizkallah, P.J., Parker, A.L.

(2023) Npj Viruses 1: 1

• DOI: https://doi.org/10.1038/s44298-023-00001-5

Biological Assembly 1  

Global Symmetry: Cyclic - C3  (Explore in 3D)
Global Stoichiometry: Homo 3-mer - A3 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: homology

Biological Assembly 2  

Global Symmetry: Cyclic - C3  (Explore in 3D)
Global Stoichiometry: Homo 3-mer - A3 

Biological assembly 2 assigned by authors.

Macromolecule Content

• Total Structure Weight: 132.75 kDa 
• Atom Count: 8,946 
• Modelled Residue Count: 1,127 
• Deposited Residue Count: 1,176 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Fiber	A, B, C, D, E, F	196	Human adenovirus 24	Mutation(s): 0  Gene Names: L5
UniProt
Find proteins for M0QUI2 (Human adenovirus 24) Explore M0QUI2  Go to UniProtKB:  M0QUI2

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 3.10 Å
• R-Value Free: 0.337 
• R-Value Work: 0.234 
• R-Value Observed: 0.239 
• Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 51.259	α = 90
b = 99.619	β = 100.26
c = 113.549	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
Aimless	data scaling
xia2	data reduction
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2023-09-20 
Deposition Author(s): Rizkallah, P.J., Parker, A.L., Mundy, R.M., Baker, A.T.

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Funding Organization	Location	Grant Number
Medical Research Council (MRC, United Kingdom)	United Kingdom	MR/N013941/1
Wellcome Trust	United Kingdom	517732

Revision History  

• Version 1.0: 2023-09-20
  Type: Initial release
  
• Version 1.1: 2023-10-11
  Changes: Database references