8IUO

respiratory syncytial virus nucleocapsid-like assembly


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.96 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Cryo-EM structure of the nucleocapsid-like assembly of respiratory syncytial virus.

Wang, Y.Zhang, C.Luo, Y.Ling, X.Luo, B.Jia, G.Su, D.Dong, H.Su, Z.

(2023) Signal Transduct Target Ther 8: 323-323

  • DOI: https://doi.org/10.1038/s41392-023-01602-5
  • Primary Citation of Related Structures:  
    8IUO

  • PubMed Abstract: 

    Respiratory syncytial virus (RSV) is a nonsegmented, negative strand RNA virus that has caused severe lower respiratory tract infections of high mortality rates in infants and the elderly, yet no effective vaccine or antiviral therapy is available. The RSV genome encodes the nucleoprotein (N) that forms helical assembly to encapsulate and protect the RNA genome from degradation, and to serve as a template for transcription and replication. Previous crystal structure revealed a decameric ring architecture of N in complex with the cellular RNA (N-RNA) of 70 nucleotides (70-nt), whereas cryo-ET reconstruction revealed a low-resolution left-handed filament, in which the crystal monomer structure was docked with the helical symmetry applied to simulate a nucleocapsid-like assembly of RSV. However, the molecular details of RSV nucleocapsid assembly remain unknown, which continue to limit our complete understanding of the critical interactions involved in the nucleocapsid and antiviral development that may target this essential process during the viral life cycle. Here we resolve the near-atomic cryo-EM structure of RSV N-RNA that represents roughly one turn of the helical assembly that unveils critical interaction interfaces of RSV nucleocapsid and may facilitate development of RSV antiviral therapy.


  • Organizational Affiliation

    The State Key Laboratory of Biotherapy, Frontiers Medical Center of Tianfu Jincheng Laboratory, Department of Geriatrics and National Clinical Research Center for Geriatrics, West China Hospital, Sichuan University, Chengdu, Sichuan, 610044, China.


Macromolecules

Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
NucleoproteinA [auth C],
B [auth A],
D [auth B],
E [auth D],
F [auth E]
362Human respiratory syncytial virus AMutation(s): 0 
Gene Names: NMZ07_64480gpNMZ07_64481gpNMZ07_64483gpNMZ07_64489gpN
UniProt
Find proteins for A0A2H4WKL8 (Human respiratory syncytial virus A)
Explore A0A2H4WKL8 
Go to UniProtKB:  A0A2H4WKL8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2H4WKL8
Sequence Annotations
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  • Reference Sequence
Find similar nucleic acids by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains LengthOrganismImage
RNA (35-MER)C [auth F]35Homo sapiens
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.96 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Ministry of Science and Technology (MoST, China)China2022YFC2303700
Ministry of Science and Technology (MoST, China)China2021YFA1301900
National Natural Science Foundation of China (NSFC)China32222040
National Natural Science Foundation of China (NSFC)China32070049

Revision History  (Full details and data files)

  • Version 1.0: 2023-09-06
    Type: Initial release