Macromolecule Content

Total Structure Weight: 69.37 kDa
Atom Count: 3,877
Modelled Residue Count: 484
Deposited Residue Count: 614
Unique protein chains: 2

8EXE

Crystal structure of human FAM46A-BCCIPa complex at 3.5 angstrom resolution

PDB DOI: 10.2210/pdb8EXE/pdb

Classification: TRANSFERASE
Organism(s): Homo sapiens
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2022-10-25 Released: 2023-03-15
Deposition Author(s): Liu, S., Zhang, X.
Funding Organization(s): National Institutes of Health/National Cancer Institute (NIH/NCI)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.50 Å
R-Value Free: 0.297
R-Value Work: 0.260
R-Value Observed: 0.262

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Inhibition of FAM46 activity by BCCIPa adopting a unique fold

Liu, S., Chen, H., Yin, Y., Shang, G., Gao, G., Li, J., Bai, X., Zhang, X.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Terminal nucleotidyltransferase 5A	A	336	Homo sapiens	Mutation(s): 0 Gene Names: TENT5A, C6orf37, FAM46A, XTP11 EC: 2.7.7.19
UniProt & NIH Common Fund Data Resources
Find proteins for Q96IP4 (Homo sapiens) Explore Q96IP4 Go to UniProtKB: Q96IP4
PHAROS: Q96IP4
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q96IP4
Protein Feature View Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Isoform 2 of BRCA2 and CDKN1A-interacting protein	B	278	Homo sapiens	Mutation(s): 0 Gene Names: BCCIP, TOK1
UniProt
Find proteins for Q9P287-2 (Homo sapiens) Explore Q9P287-2 Go to UniProtKB: Q9P287-2
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q9P287-2
Protein Feature View Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.50 Å
R-Value Free: 0.297
R-Value Work: 0.260
R-Value Observed: 0.262
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 87.8	α = 90
b = 88.152	β = 90
c = 102.981	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
Coot	model building
HKL-3000	data reduction
HKL-3000	data scaling
PHENIX	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2023-03-15

Deposition Author(s):

Funding Organization	Location	Grant Number
National Institutes of Health/National Cancer Institute (NIH/NCI)	United States	1R01CA220283

Revision History (Full details and data files)

Version 1.0: 2023-03-15
Type: Initial release

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.