8D46 | pdb_00008d46

Cryo-electron microscopy structure of human kidney Aldehyde Dehydrogenase 1A1

PDB DOI: https://doi.org/10.2210/pdb8D46/pdb
EM Map EMD-27176: EMDB EMDataResource

Classification: HYDROLASE
Organism(s): Homo sapiens
Expression System: Homo sapiens
Mutation(s): No

Deposited: 2022-06-01 Released: 2022-11-16
Deposition Author(s): Lyu, M., Yu, E.W.
Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Validation slider image for 8D46

This is version 1.1 of the entry. See complete history.

Literature

Cryo-electron microscopy structure of human kidney Aldehyde Dehydrogenase 1A1

Lyu, M., Yu, E.W.

To be published.

Macromolecule Content

Total Structure Weight: 219.7 kDa
Atom Count: 15,110
Modeled Residue Count: 1,956
Deposited Residue Count: 2,004
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Retinal dehydrogenase 1	A, B [auth C], C [auth D], D [auth B]	501	Homo sapiens	Mutation(s): 0 Gene Names: ALDH1A1, ALDC, ALDH1, PUMB1 EC: 1.2.1 (PDB Primary Data), 1.2.1.36 (PDB Primary Data), 1.2.1.19 (UniProt), 1.2.1.28 (UniProt), 1.2.1.3 (UniProt)
UniProt & NIH Common Fund Data Resources
Find proteins for P00352 (Homo sapiens) Explore P00352 Go to UniProtKB: P00352
PHAROS: P00352 GTEx: ENSG00000165092
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P00352
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 2.84 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

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View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2022-11-16

Deposition Author(s):

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	R01 AI145069

Revision History (Full details and data files)

Version 1.0: 2022-11-16
Type: Initial release
Version 1.1: 2024-06-12
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.