YdaS from the Escherichia coli cryptic prophage CP-933P forms an evolutionary link between Cro repressors and HigA antitoxins
Prolic-Kalinsek, M., Volkov, A.N., Hadzi, S., Bervoets, I., Loris, R.To be published.
Experimental Data Snapshot
Starting Model: experimental
View more details
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Putative antirepressor protein Cro | 94 | Escherichia coli O157 | Mutation(s): 0  Gene Names: A2F99_004475 | ![]() | |
UniProt | |||||
Find proteins for A0A0D7C0Q9 (Escherichia coli) Explore A0A0D7C0Q9  Go to UniProtKB:  A0A0D7C0Q9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0D7C0Q9 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SO4 Query on SO4 | C [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
IPA Query on IPA | D [auth B] | ISOPROPYL ALCOHOL C3 H8 O KFZMGEQAYNKOFK-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 42.71 | α = 90 |
b = 42.71 | β = 90 |
c = 65.09 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
XDS | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Research Foundation - Flanders (FWO) | Belgium | G.0033.20N |
Research Foundation - Flanders (FWO) | Belgium | G.0226.17N |