8B9S

NATIVE FORM, THERMOSTABLE LIPASE FROM THERMOANAEROBACTER THERMOHYDROSULFURICUS

PDB DOI: https://doi.org/10.2210/pdb8B9S/pdb

Classification: HYDROLASE
Organism(s): Thermoanaerobacter thermohydrosulfuricus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2022-10-06 Released: 2023-10-18
Deposition Author(s): Pinotsis, N., Wilmanns, M.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.42 Å
R-Value Free: 0.255
R-Value Work: 0.217
R-Value Observed: 0.218

wwPDB Validation 3D Report Full Report

Ligand Structure Quality Assessment

This is version 1.0 of the entry. See complete history.

Literature

NATIVE FORM, THERMOSTABLE LIPASE FROM THERMOANAEROBACTER THERMOHYDROSULFURICUS

Pinotsis, N., Wilmanns, M.

To be published.

Macromolecule Content

Total Structure Weight: 176.34 kDa
Atom Count: 12,661
Modelled Residue Count: 1,554
Deposited Residue Count: 1,554
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Prolyl oligopeptidase family protein	A, B, C, D, E A, B, C, D, E, F	259	Thermoanaerobacter thermohydrosulfuricus	Mutation(s): 0 Gene Names: ThesiDRAFT1_1468
UniProt
Find proteins for A0A1G7VV58 (Thermoanaerobacter thermohydrosulfuricus) Explore A0A1G7VV58 Go to UniProtKB: A0A1G7VV58
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A1G7VV58
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 4 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
D10 (Subject of Investigation/LOI) Query on D10 Download Ideal Coordinates CCD File SDF format, chain H [auth A] MOL2 format, chain H [auth A]	H [auth A]	DECANE C₁₀ H₂₂ DIOQZVSQGTUSAI-UHFFFAOYSA-N		Interactions Focus chain H [auth A] Interactions & Density Focus chain H [auth A]
PO4 Query on PO4 Download Ideal Coordinates CCD File SDF format, chain J [auth B] SDF format, chain K [auth B] SDF format, chain M [auth D] SDF format, chain O [auth E] SDF format, chain P [auth E] MOL2 format, chain J [auth B] MOL2 format, chain K [auth B] MOL2 format, chain M [auth D] MOL2 format, chain O [auth E] MOL2 format, chain P [auth E]	J [auth B], K [auth B], M [auth D], O [auth E], P [auth E]	PHOSPHATE ION O₄ P NBIIXXVUZAFLBC-UHFFFAOYSA-K		Interactions Focus chain J [auth B] Focus chain K [auth B] Focus chain M [auth D] Focus chain O [auth E] Focus chain P [auth E] Interactions & Density Focus chain J [auth B] Focus chain K [auth B] Focus chain M [auth D] Focus chain O [auth E] Focus chain P [auth E]
GOL Query on GOL Download Ideal Coordinates CCD File SDF format, chain G [auth A] SDF format, chain I [auth B] SDF format, chain L [auth C] SDF format, chain N [auth E] SDF format, chain Q [auth F] MOL2 format, chain G [auth A] MOL2 format, chain I [auth B] MOL2 format, chain L [auth C] MOL2 format, chain N [auth E] MOL2 format, chain Q [auth F]	G [auth A], I [auth B], L [auth C], N [auth E], Q [auth F]	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Interactions Focus chain G [auth A] Focus chain I [auth B] Focus chain L [auth C] Focus chain N [auth E] Focus chain Q [auth F] Interactions & Density Focus chain G [auth A] Focus chain I [auth B] Focus chain L [auth C] Focus chain N [auth E] Focus chain Q [auth F]
K Query on K Download Ideal Coordinates CCD File SDF format, chain R [auth F] MOL2 format, chain R [auth F]	R [auth F]	POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N		Interactions Focus chain R [auth F] Interactions & Density Focus chain R [auth F]