8AGF

Crystal structure of human Thiosulfate sulfurtransferase amino acids 2-297

PDB DOI: https://doi.org/10.2210/pdb8AGF/pdb

Classification: STRUCTURAL PROTEIN
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2022-07-19 Released: 2022-09-14
Deposition Author(s): Goor, H.v., Grove, M.R., AL-Dahmani, Z.m.
Funding Organization(s): Dutch Kidney Foundation

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 3.40 Å
R-Value Free: 0.278
R-Value Work: 0.196

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

The crystal structure of human Thiosulfate sulfurtransferase

ALDahmani, Z., Groves, M., Goor, H., Wang, C.

To be published.

Macromolecule Content

Total Structure Weight: 32.65 kDa
Atom Count: 2,302
Modelled Residue Count: 290
Deposited Residue Count: 290
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Thiosulfate sulfurtransferase	A	290	Homo sapiens	Mutation(s): 0 Gene Names: TST EC: 2.8.1.1
UniProt & NIH Common Fund Data Resources
Find proteins for Q16762 (Homo sapiens) Explore Q16762 Go to UniProtKB: Q16762
PHAROS: Q16762 GTEx: ENSG00000128311
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q16762
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 3.40 Å
R-Value Free: 0.278
R-Value Work: 0.196
Space Group: I 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 41.93	α = 90
b = 48.543	β = 96.369
c = 152.501	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
REFMAC	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2022-09-14

Deposition Author(s):

AL-Dahmani, Z.m.

Funding Organization	Location	Grant Number
Dutch Kidney Foundation	Netherlands	--

Revision History (Full details and data files)

Version 1.0: 2022-09-14
Type: Initial release
Version 1.1: 2024-01-31
Changes: Data collection, Refinement description

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.