8A1R

cryo-EM structure of thioredoxin glutathione reductase in complex with a non-competitive inhibitor


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Non-covalent inhibitors of thioredoxin glutathione reductase with schistosomicidal activity in vivo.

Petukhova, V.Z.Aboagye, S.Y.Ardini, M.Lullo, R.P.Fata, F.Byrne, M.E.Gabriele, F.Martin, L.M.Harding, L.N.M.Gone, V.Dangi, B.Lantvit, D.D.Nikolic, D.Ippoliti, R.Effantin, G.Ling, W.L.Johnson, J.J.Thatcher, G.R.J.Angelucci, F.Williams, D.L.Petukhov, P.A.

(2023) Nat Commun 14: 3737-3737

  • DOI: https://doi.org/10.1038/s41467-023-39444-y
  • Primary Citation of Related Structures:  
    8A1R

  • PubMed Abstract: 

    Only praziquantel is available for treating schistosomiasis, a disease affecting more than 200 million people. Praziquantel-resistant worms have been selected for in the lab and low cure rates from mass drug administration programs suggest that resistance is evolving in the field. Thioredoxin glutathione reductase (TGR) is essential for schistosome survival and a validated drug target. TGR inhibitors identified to date are irreversible and/or covalent inhibitors with unacceptable off-target effects. In this work, we identify noncovalent TGR inhibitors with efficacy against schistosome infections in mice, meeting the criteria for lead progression indicated by WHO. Comparisons with previous in vivo studies with praziquantel suggests that these inhibitors outperform the drug of choice for schistosomiasis against juvenile worms.


  • Organizational Affiliation

    Department of Pharmaceutical Sciences, College of Pharmacy, University of Illinois at Chicago, Chicago, IL, USA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Thioredoxin glutathione reductase
A, B
598Schistosoma mansoniMutation(s): 1 
Gene Names: TGR
EC: 1.6.4.5
UniProt
Find proteins for Q962Y6 (Schistosoma mansoni)
Explore Q962Y6 
Go to UniProtKB:  Q962Y6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ962Y6
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
FAD
Query on FAD

Download Ideal Coordinates CCD File 
C [auth A],
E [auth B]
FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
KW2 (Subject of Investigation/LOI)
Query on KW2

Download Ideal Coordinates CCD File 
D [auth A],
F [auth B]
(2~{R},3~{R},4~{S},5~{R})-2-[3-[[[(1~{R},2~{R},3~{R},5~{S})-2,6,6-trimethyl-3-bicyclo[3.1.1]heptanyl]amino]methyl]indol-1-yl]oxane-3,4,5-triol
C24 H34 N2 O4
REWBXBSHPDNQFU-SSADRMGMSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION
MODEL REFINEMENTPHENIX

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United StatesR33AI127635

Revision History  (Full details and data files)

  • Version 1.0: 2023-06-14
    Type: Initial release
  • Version 1.1: 2023-07-05
    Changes: Database references