Download MendeleyStructure of Citrate synthase/lyase from Desulfurella acetivorans Desace_08345 complex with citrate
Yang, L.To be published.
7WBR
Citrate synthase/lyase from Desulfurella acetivorans Desace_08345
- PDB DOI: https://doi.org/10.2210/pdb7WBR/pdb
- Classification: TRANSFERASE
- Organism(s): Desulfurella acetivorans
- Expression System: Escherichia phage EcSzw-2
- Mutation(s): Yes
- Deposited: 2021-12-17 Released: 2022-01-05
- Funding Organization(s): Ministry of Science and Technology (MoST, China)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.19 Å
- R-Value Free: 0.249
- R-Value Work: 0.196
- R-Value Observed: 0.198
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Citrate synthase | 436 | Desulfurella acetivorans | Mutation(s): 7 Gene Names: ENO40_01140 EC: 2.3.3.16 |  | |
UniProt | |||||
Find proteins for A0A7C2VVZ8 (Desulfurella acetivorans) Explore A0A7C2VVZ8 Go to UniProtKB: A0A7C2VVZ8 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A7C2VVZ8 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CIT (Subject of Investigation/LOI) Query on CIT | I [auth A], J [auth B], K [auth C], L [auth D], M [auth E], | CITRIC ACID C6 H8 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.19 Å
- R-Value Free: 0.249
- R-Value Work: 0.196
- R-Value Observed: 0.198
- Space Group: H 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 362.335 | α = 90 |
| b = 362.335 | β = 90 |
| c = 77.886 | γ = 120 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2022-01-05 Deposition Author(s): Yang, L.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Ministry of Science and Technology (MoST, China) | China | -- |
Revision History (Full details and data files)
- Version 1.0: 2022-01-05
Type: Initial release
