7DNB

Crystal structure of PhoCl barrel


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.81 Å
  • R-Value Free: 0.335 
  • R-Value Work: 0.275 
  • R-Value Observed: 0.281 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Photocleavable Proteins that Undergo Fast and Efficient Dissociation.

Lu, X.Wen, Y.Zhang, S.Zhang, W.Chen, Y.Shen, Y.Lemieux, J.M.Campbell, R.E.

(2021) Chem Sci 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
PhoCl BarrelB [auth A], C [auth B], A [auth C], D242Aequorea victoriaMutation(s): 0 
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA (Subject of Investigation/LOI)
Query on NA

Download Ideal Coordinates CCD File 
E [auth B]SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
NFA
Query on NFA
A [auth C], B [auth A], C [auth B], DL-PEPTIDE LINKINGC9 H12 N2 OPHE
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.81 Å
  • R-Value Free: 0.335 
  • R-Value Work: 0.275 
  • R-Value Observed: 0.281 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 46.4α = 90
b = 119.64β = 107.66
c = 65.26γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XDSdata scaling
MOLREPphasing

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

  • Deposited Date: 2020-12-09 
  • Released Date: 2021-01-27 
  • Deposition Author(s): Wen, Y., Lemieux, J.M.

Revision History  (Full details and data files)

  • Version 1.0: 2021-01-27
    Type: Initial release
  • Version 1.1: 2021-06-16
    Changes: Database references