Download MendeleyCrystal structure of the full-length short LOV protein SBW25-LOV from Pseudomonas fluorescens (light state)
Arinkin, V., Batra-Safferling, R., Granzin, J.To be published.
7YX0
Crystal structure of the full-length short LOV protein SBW25-LOV from Pseudomonas fluorescens (light state)
- PDB DOI: https://doi.org/10.2210/pdb7YX0/pdb
- Classification: SIGNALING PROTEIN
- Organism(s): Pseudomonas fluorescens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2022-02-15 Released: 2023-05-24
- Funding Organization(s): Not funded
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.238
- R-Value Work: 0.188
- R-Value Observed: 0.191
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Putative regulatory protein | A, B [auth C] | 175 | Pseudomonas fluorescens | Mutation(s): 0 Gene Names: PFLU_5153 |  |
UniProt | |||||
Find proteins for C3K1W0 (Pseudomonas fluorescens (strain SBW25)) Explore C3K1W0 Go to UniProtKB: C3K1W0 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | C3K1W0 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| JGC (Subject of Investigation/LOI) Query on JGC | D [auth A], F [auth C] | Flavin mononucleotide (semi-quinone intermediate) C17 H23 N4 O9 P JNFNEOXSUODPSY-DGAVXFQQSA-N |  | Ligand Interaction | |
| FMN (Subject of Investigation/LOI) Query on FMN | C [auth A], E [auth C] | FLAVIN MONONUCLEOTIDE C17 H21 N4 O9 P FVTCRASFADXXNN-SCRDCRAPSA-N |  | Ligand Interaction | |
| ACT Query on ACT | G [auth C] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | Ligand Interaction | |
| NA Query on NA | H [auth C] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.60 Å
- R-Value Free: 0.238
- R-Value Work: 0.188
- R-Value Observed: 0.191
- Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 36.255 | α = 95.269 |
| b = 42.438 | β = 95.707 |
| c = 51.744 | γ = 109.017 |
| Software Name | Purpose |
|---|---|
| MxCuBE | data collection |
| XDS | data reduction |
| Aimless | data scaling |
| MOLREP | phasing |
| PHENIX | refinement |
| MOLREP | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2023-05-24 Deposition Author(s): Arinkin, V., Batra-Safferling, R., Granzin, J.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Not funded | -- |
Revision History (Full details and data files)
- Version 1.0: 2023-05-24
Type: Initial release
