7T7W | pdb_00007t7w

The peptide Lt-MAP4 is an analog derived from the Ltc-3a. The primary sequence of the parental peptide was used as template for rational design, using the amino acid residues for modification of charge and hydrophobicity.

PDB DOI: https://doi.org/10.2210/pdb7T7W/pdb
BMRB: 30976

Classification: ANTIMICROBIAL PROTEIN
Organism(s): Lachesana tarabaevi
Mutation(s): No

Deposited: 2021-12-15 Released: 2023-01-25
Deposition Author(s): Freitas, C.D.P., Moraes, L.F.R.N., Migliolo, L., Liao, L.M.
Funding Organization(s): Other government

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Two-dimensional NMR structural study of latarasin analogue Lt-MAP4 multifunctional synthetic peptide.

Freitas, C.D.P., Liao, L.M., Migliolo, L., Moraes, L.F.R.N.

To be published.

Macromolecule Content

Total Structure Weight: 1.48 kDa
Atom Count: 105
Modeled Residue Count: 11
Deposited Residue Count: 11
Unique protein chains: 1

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Lt-MAP4 peptide	A	11	Lachesana tarabaevi	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 10
Selection Criteria: structures with the lowest energy

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2023-01-25

Deposition Author(s):

Freitas, C.D.P.

Moraes, L.F.R.N.

Funding Organization	Location	Grant Number
Other government	Brazil	--

Revision History (Full details and data files)

Version 1.0: 2023-01-25
Type: Initial release
Version 1.1: 2024-05-15
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.