7T7W

The peptide Lt-MAP4 is an analog derived from the Ltc-3a. The primary sequence of the parental peptide was used as template for rational design, using the amino acid residues for modification of charge and hydrophobicity.


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D 1H-1H TOCSY1 mM Latarasin-L4, 100 mM [U-98% 2H] SDS-d25, 0.035 % [U-98% 2H] DSS-d690% H2O/10% D2Oacid4.461 atm313Bruker AVANCE III 500
22D 1H-1H NOESY1 mM Latarasin-L4, 100 mM [U-98% 2H] SDS-d25, 0.035 % [U-98% 2H] DSS-d690% H2O/10% D2Oacid4.461 atm313Bruker AVANCE III 500
32D 1H-13C HSQC1 mM Latarasin-L4, 100 mM [U-98% 2H] SDS-d25, 0.035 % [U-98% 2H] DSS-d690% H2O/10% D2Oacid4.461 atm313Bruker AVANCE III 500
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III500
NMR Refinement
MethodDetailsSoftware
simulated annealingCNS
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number10
Representative Model1 (lowest energy)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1chemical shift assignmentCcpNmr AnalysisCCPN
2structure calculationARIALinge, O'Donoghue and Nilges
3processingTopSpinBruker Biospin
4peak pickingCcpNmr AnalysisCCPN
5refinementCNSBrunger, Adams, Clore, Gros, Nilges and Read