7N8Y

Oxidized PheRS G318W from Salmonella enterica serovar Typhimurium


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.65 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Oxidation alters the architecture of the phenylalanyl-tRNA synthetase editing domain to confer hyperaccuracy.

Srinivas, P.Steiner, R.E.Pavelich, I.J.Guerrero-Ferreira, R.Juneja, P.Ibba, M.Dunham, C.M.

(2021) Nucleic Acids Res 49: 11800-11809

  • DOI: 10.1093/nar/gkab856
  • Primary Citation of Related Structures:  
    7N8Y

  • PubMed Abstract: 
  • High fidelity during protein synthesis is accomplished by aminoacyl-tRNA synthetases (aaRSs). These enzymes ligate an amino acid to a cognate tRNA and have proofreading and editing capabilities that ensure high fidelity. Phenylalanyl-tRNA synthetase (PheRS) preferentially ligates a phenylalanine to a tRNAPhe over the chemically similar tyrosine, which differs from phenylalanine by a single hydroxyl group ...

    High fidelity during protein synthesis is accomplished by aminoacyl-tRNA synthetases (aaRSs). These enzymes ligate an amino acid to a cognate tRNA and have proofreading and editing capabilities that ensure high fidelity. Phenylalanyl-tRNA synthetase (PheRS) preferentially ligates a phenylalanine to a tRNAPhe over the chemically similar tyrosine, which differs from phenylalanine by a single hydroxyl group. In bacteria that undergo exposure to oxidative stress such as Salmonella enterica serovar Typhimurium, tyrosine isomer levels increase due to phenylalanine oxidation. Several residues are oxidized in PheRS and contribute to hyperactive editing, including against mischarged Tyr-tRNAPhe, despite these oxidized residues not being directly implicated in PheRS activity. Here, we solve a 3.6 Å cryo-electron microscopy structure of oxidized S. Typhimurium PheRS. We find that oxidation results in widespread structural rearrangements in the β-subunit editing domain and enlargement of its editing domain. Oxidization also enlarges the phenylalanyl-adenylate binding pocket but to a lesser extent. Together, these changes likely explain why oxidation leads to hyperaccurate editing and decreased misincorporation of tyrosine. Taken together, these results help increase our understanding of the survival of S. Typhimurium during human infection.


    Organizational Affiliation

    Antibiotic Resistance Center, Emory University, Atlanta, GA 30322, USA.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Phenylalanine--tRNA ligase alpha subunitA, C327Salmonella enterica subsp. enterica serovar TyphimuriumMutation(s): 0 
Gene Names: 
pheSA3104_13190A3S30_01905A3T81_02210A3U32_01890A3V03_02210A3V89_07870A3W57_02210A3W75_02210A3X15_02420A3X55_04930A3Y76_18650A4N07_02210A4O05_00515A4O41_08155A4R48_00550A6D61_02250AAA76_02395AAB27_00510AAB79_06200AAC35_02210ADQ28_00510AF497_12870AGM99_04205AHN93_04435AIT36_13070AKH62_14865AL144_02880AL168_05350AL184_05265AQ530_07210AU613_01875AVA38_05590AVC05_14850AVL16_00440AWT30_01230AXX99_02285B1265_03945B1398_17315B1642_01050B1P38_01855B2E31_05425B4V59_07315B4W90_00440B6362_01805B7Q27_03945B8Y16_08540B8Z46_00440B9C90_00575B9C96_02155B9M14_01050B9O84_01635BBQ66_02285BG493_13070BIC00_04470BIC13_01790BK110_04145BKM50_02520BMS46_02960BMU56_02285BZ203_02650BZZ88_10895C5W43_00555CA117_11660CAC56_12730CAC59_12960CB102_12870CB119_21945CB198_13700CB380_02210CB535_17470CB570_15220CB646_09670CBM67_02210CBM76_02210CBZ90_03995CC339_14580CC403_16155CC453_05170CC652_06355CC971_17320CCP17_04205CDZ72_09425CE70_03355CED07_02285CEQ70_10285CFF58_00555CFF59_00480CHN22_00440CIX60_03820CPS79_10120CQO33_07735CSG22_07610CVR97_21280D4361_05240D4387_12230D4422_17185D5823_05110D5N86_10035D5N95_14265D5O82_02280D5P17_09965D5X47_02260D5Y28_12040D6422_01065D6J79_09390D8S24_09035DD95_21115DLB93_09305DLR28_02955DMI89_00555DMO92_09200DN165_00615DNB97_04905DNM27_09825DNZ37_08435DO533_04230DP680_09285DPB42_12990DPD91_01105DPF41_03570DPF68_02270DPS76_13880DQD22_00615DQR44_02265DRM14_02270DRT38_08625DRT61_01110DRV05_08080DSF94_11155DSG41_13185DTF68_06560DU071_03830DU223_17785DU657_01015DU879_09655DUV75_18835DWU22_03020DY580_13845DYM27_24045E0935_07945E1A11_02250E6W45_04075EBD14_05105EBK21_02260EC404_09465EER35_08015EHB09_09205EL822_08280ELS01_02245EPB30_02260EQG93_11700EVY71_11025EW905_04755F0D96_00390F2P00_01485F3Q97_04970F3R12_02205F9G02_06620F9O44_11610FE758_12720FEM52_00580FGZ46_09495FJM64_02215FQC24_08330FQX78_08625G0038_14260G0040_02520G0042_06400G0045_01640G0047_01485G0048_01640G0051_01555G0052_01565G0059_02170G0061_02645G0062_01485G0063_01640G0067_01550G0069_01555G0070_01485G0071_10420G0072_12130G0074_00905G0076_05060G0077_01565G0080_01555G0084_01485G0086_01640G0087_01640G0088_00905G0089_01300G0090_00040G0094_01560G0100_01640G0101_01990G0102_02220G0111_01565G0113_11010G0117_01635G0123_01640G0124_01540G0148_01565G0157_01055G0170_01565G0A05_08055G0A28_13680G0A32_02245G0A39_02245G0A43_01975G0A46_00945G0A50_02245G0A51_02245G0A52_02245G0A53_05915G0A56_08070G0A58_01940G0A60_02245G0A61_02245G0A63_07355G0A67_02245G0A68_02245G0A70_03810G0A73_02225G0A76_02030G0A79_02245G0A85_13075G0A88_11120G0A92_01950G0A96_02275G0A97_02245G0A99_14200G0B03_02260G0B05_01110G0B07_11535G0B08_02265G0B12_07145G0B28_02350G0B96_02600G0C03_01775G0C04_03375G0C34_02295G0E15_01565G0E20_09365G0G84_03325G0J24_10305G0J26_02255G0J27_02210G0J28_02265G0J31_12390G0J33_03050G0J34_03325G0J36_02270G0J37_13000G0J40_02270G0J43_11760G0J44_02270G0J45_02270G0J46_02840G0J47_03325G0J49_03315G0J50_14915G0J51_02260G0J53_01560G0J55_02840G0J58_02270G0J59_02255G0J62_20145G0J65_05215G0J66_01545G0J67_04590G0J69_01560G0J71_01560G0J73_02335G0J76_01570G0J79_07520G0J81_01560G0J82_12515G0J85_01560G0J89_04725G0J92_02265G0J94_15645G0J96_05195G0J97_01560G0K00_02265G0K02_02250G0K03_02270G0K04_09580G0K05_02520G0K07_01560G0K10_13530G0K13_01560G0K15_02870G0K16_04875G0K18_02565G0K19_07025G0K20_03660G0K23_02260G0K25_02795G0K26_01545G0K28_05760G0K30_04290G0K31_04575G0K32_05145G0K33_01330G0K37_02635G0K38_02565G0K39_05855G0K41_05480G0K42_05135G0K46_01560G0K47_06520G0K48_04795G0K49_02335G0K52_07305G0K53_07850G0K56_16505G0K58_02195G0K59_04720G0K61_14090G0K65_02260G0K68_12160G0K70_01105G0K72_01560G0K74_02255G0K75_02270G0K78_01560G0K80_10350G0K83_13365G0K84_02570G0K85_14635G0K88_003998G0K89_003067G0K90_003904G0K94_004141G0K95_004184G0L00_002939G0L02_003582G0L03_18900G0L06_16130G0L07_22455G0L10_19335G0L14_20820G0L15_15040G0L18_14805G0L19_12900G0L20_12495G0L24_05725G0L25_07395G0L29_19380G0L31_12040G0L32_19940G0L34_16220G0L35_17725G0L36_17445G0L37_03405G0L38_16955G0L40_06495G0L42_20935G0L48_21665G0L49_23005G0L51_06960G0L52_03685G0L55_01905G0L59_08260G0L62_07190G0L63_06795G0L65_05715G0L67_09345G0L68_00905G0L70_06765G0L73_04010G0L76_01905G0L77_01905G0L78_00905G0L79_01910G0L85_01090G0L86_000111G0L88_14440G0L89_01875G0L91_08260G0L93_01905G0L96_01905G0L98_01905G0M00_06100G0M05_11855G0M06_000074G0M10_11655G0M13_001695G0M14_01355G0M16_12255G0M18_003953G0M21_23345G0M22_001983G0M25_000882G0M26_06590G0M27_13345G0M28_07085G0M29_001077G0M30_13015G0M33_01660G0M35_01905G0M36_11920G0M38_08650G0M39_08700G0M40_21740G0M41_09415G0M45_09170G0M46_002274G0M48_001583G0M51_03455G0M53_09590G0M55_01875G0M56_05490G0M58_05495G0M63_09870G0M65_00575G0M67_01875G0N45_00905G0N48_02215G0N51_05485G0N53_02215G0N55_00905G0N57_22510G0N58_00580G0N59_01490G0N60_01000G0N61_01485G0N62_06725G0N64_00160G0N65_02215G0N66_00980G0N67_02215G0N71_00520G0N75_01485G0N78_05000G0N82_03215G0N84_01485G0N85_02210G0N86_00905G0N88_03250G0N89_01550G0N90_02210G0N92_01530G0N94_01890G0N95_02210G0N98_01480G0N99_00165G0O00_02520G0O03_18965G0O10_01050G0O14_10065G0O15_05395G0O19_01990G0O20_02220G0O22_02210G0O25_04935G0O27_00905G0O31_00905G0O32_08440G0O36_15115G0O37_11785G0O39_01485G0O40_01485G0O41_02470G0O42_02525G0O43_01555G0O44_18805G0O47_00905G0O52_00905G0O55_00620G0O57_02515G0O58_01555G0O59_10480G0O60_00905G0O63_00905G0O66_05600G0O68_01050G0O70_01555G0O71_01485G0O74_06385G0O75_01555G0O77_01480G0O78_00905G0O80_00905G0O81_01595G0O82_01555G0O84_01555G0O85_01615G0O86_07410G0O87_06515G0O88_00070G0O89_01925G0O92_01555G0O93_01915G0O94_07740G0O97_01885G0O99_08795G0P00_09325G0P01_01600G0P02_02520G0P05_07680G0P06_01555G0P08_02520G0P12_07515G0P13_01555G0P17_00905G0P18_15450G0P19_01720G0P24_00510G0P26_01485G0P28_01555G0P30_01485G0P31_01555G0P36_01515G0P37_01745G0P41_03020G0P44_02630G0P45_06090G0P48_01555G0P49_04920G0P52_01555G0P53_14785G0P56_00905G0P57_01555G0P58_00905G0P63_17140G0P65_00790G0P67_05265G0P68_04005G0P69_01845G0P73_00510G0P75_10250G0P76_00140G1N61_02240G1N64_02235G1N66_02225G1N68_02225G1N71_02240G1N72_02235G1N86_02240G1N87_02240G1N91_05150G1O00_14160G1O02_02240G1O04_02240G1O05_02235G1O08_02225G1O10_01655G1O12_02240G1O16_02240G1O17_02240G1O18_02235G1O20_02240G1O23_02240G1O25_02225G1O26_02240G1O27_02225G1O28_02240G1O29_02240G1O32_02225G1O34_02240G1O38_02225G1O40_02240G1O43_02225G1O46_12670G1O48_02240G1O49_02240G1O51_02240G1O53_02240G1O62_02240G1O65_02240G1O67_02240G1O68_02240G1O69_02240G1O71_02240G1O72_02240G1O76_02240G1O77_02240G1O80_02240G1O81_02240G1O83_02240G1O84_02240G1O87_02240G1O88_02240G1O89_02240G1O90_02240G1O93_02235G1O94_02225G1O96_02240G1P02_02225G1P03_00605G1P06_02225G1P09_02225G1P10_02240G1P12_02240G1P14_03095G1P15_00240G1P17_02240G1P19_02240G1P23_02240G1P24_02240G1P25_02240G1P26_02240G1P29_00605G1P31_02225G1P35_02240G1P36_02240G1P37_00605G1P40_13040G1P44_02235G1P45_02240G1P47_02240G1P48_02240G1P51_02240G1P52_00605G1P53_00605G1P54_02240G1P55_02240G1P56_02225G1P57_02240G1P58_02225G1P59_02240G1P61_01655G1P64_02240G1P67_02240G1P69_02225G1P72_02235G1P75_02240G1P76_02225G1P78_02245G1P83_02260G1P84_02240G1P87_02230G1P90_02240G1P91_02230G1Q03_02240G1Q08_14940G1Q67_02235G1Q78_02225G1Q81_02240G1Q83_02240G1Q84_02225G1Q85_02225G1Q86_02225G1Q88_07735G1Q90_02225G1Q91_02240G1Q93_03490G1Q96_02225G1Q98_02240G1Q99_02225G1R01_02240G1R02_14155G1R03_02240G1R04_02240G1R08_02240G1R13_01795G1R15_11710G1R20_10355G1R21_01920G1R22_14600G1R23_02225G1R27_02240G1R28_02240G1R29_02240G1R30_02240G1R31_02240G1R36_02240G1R38_02240G1R40_13755G1R42_09560G1R44_02240G1R45_02225G1R47_02240G1R48_13900G1R51_02225G1R52_00045G1R53_02225G1R63_02240G1R69_05580G1R87_02225G1R93_02225G1S02_02240G2203_01565G2212_02945G2218_01195G2221_20490G2279_05945G2290_08705G2793_01525G2918_04620G2951_02210G3221_000755G3230_000103G3231_000315G3247_001257G3248_000329G3254_000291G3263_001642G3270_002093G3275_000443G3312_000895G3336_004578G3357_001375G3369_000394G3433_001625G3460_000624G3464_002372G3593_000522G3A35_02480G3V06_000383G3V14_000532G3V17_001015G3V21_002560G3V56_001128G3V57_000348G3X03_000385G4189_000346G4190_000183G4192_002019G4198_000183G4201_001564G4202_001188G4A01_000280G4A73_000506G4A83_000297G4A85_000506G4A87_000444G4B68_000487G4B72_000865G4B74_000444G4C74_000444G4D32_000015G4D46_000441G4F88_10965G4F89_13075G4F91_12735G4F92_11285G4G47_000944G4G62_004416G4G67_000412G4G68_001217G4G75_000447G4G76_000276G4G79_003257G4G97_001948G4H00_000506G4H04_000563G4H07_000642G4H08_001439G4H18_000444G4H21_000444G4H24_000443G4H63_000088G4I66_001757G4J07_000220G4J08_000745G4J11_002502G4J12_004854G4J18_000043G4J37_000307G4J39_004395G4J41_001804G4J45_000232G4J90_000087G4K02_000565G4K03_002505G4O54_000346G4O56_002140G4O59_001618G4O60_000383G4O67_000366G4O69_000653G4P29_002180G4P83_000506G4P85_000506G4P89_000912G4P91_000417G4P93_000506G4Q12_000386G4Q28_000443G4Q31_000441G4Q50_000106G4Q52_000106G4Q59_000506G4Q60_000506G4Q63_001954G4Q67_000584G4Q94_000544G4R01_000506G4R02_000506G4R15_000737G4R16_000443G4W68_000798G4W73_000723G4W86_000444G4W87_000443G4W88_000443G4W91_001377G4Y10_000616G9269_000103G9302_000506G9304_002845G9305_001289G9309_002043G9313_000506G9314_002038G9367_000444G9381_000446G9C24_004703G9C41_000383G9C46_000183G9C47_000383G9C49_000441G9C57_000441G9C64_001161G9G03_001637G9G04_000106G9G34_000172G9G45_000309G9G50_000307G9G62_000307G9W19_001842G9W28_001385G9W45_002914G9W52_002942G9W63_001375G9W65_000441G9W79_000443G9W95_000444G9W96_001562G9X40_004524GB021_01485GB040_07725GB055_11565GB076_01385GB106_02210GB114_02210GB120_01480GB122_04695GB131_02925GB139_02215GB171_02210GB209_00110GB221_06020GB224_08915GB238_06490GB280_01555GB321_01555GB331_02215GB339_02035GB342_02405GB368_08340GB372_08810GB416_01720GB452_07840GB459_08010GB466_05395GB505_04615GB510_01095GB551_00125GB567_01190GB645_07365GBS44_05370GBS58_04720GBV53_02210GBV54_02530GBV60_01480GBW03_13415GBW44_03395GBW52_02210GBW76_00110GBX12_06555GBX20_05600GBX46_02525GBX55_01720GBX64_02510GBY13_05050GBY23_07280GBY73_02220GBZ51_10120GBZ55_15580GCZ80_01045GEZ01_08435GJE27_01545GNA59_001628GNA88_001545GNA97_001610GNA99_001544GNB28_003576GNB36_003979GNB86_000363GNB92_002369GNC11_000441GNC19_000441GNC45_000440GNC75_000441GNC95_000442GND07_000275GT380_02255GTH60_01525GTH62_07520GTH63_01050GTH66_04730GTH67_01090GTH68_07050GTH70_01905GTH72_16730GTH73_01485GTH75_01555GTH77_06065GTH78_02520GTH79_14890GTH81_05230GTH85_01485GTH87_00905GTH89_04020GTH90_08670GTH91_01545GTH93_01555GTH94_08050GTH99_06075GXC51_04145GXC56_04145GXG40_04145GYI58_02245GYI62_000383GYI77_02600GYJ04_01060GYJ24_22915GYJ27_08765GYJ28_001083GYJ30_01485GYJ32_01565GYJ53_02240GYJ59_02240GYJ60_02225H8S97_06865JJB80_06885JJB81_06880KP44_04205NG06_17870R035_01495SE14_01403SEL4126_25210STMLT2P22_CBEKMEGD_02146Z700_02210ZV33_02205ZX03_06100ZY40_01805

EC: 6.1.1.20
UniProt
Find proteins for A0A0F7J874 (Salmonella typhimurium)
Explore A0A0F7J874 
Go to UniProtKB:  A0A0F7J874
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UniProt GroupA0A0F7J874
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Phenylalanine--tRNA ligase beta subunitB, D795Salmonella enterica subsp. enterica serovar TyphimuriumMutation(s): 1 
Gene Names: 
pheTA3104_13195A3S30_01910A3T81_02205A3U32_01895A3V03_02205A3V89_07875A3W57_02205A3W75_02205A3X15_02425A3X55_04935A3Y76_18655A4N07_02205A4O05_00520A4O41_08150A4R48_00555A6D61_02245AAA76_02400AAB27_00515AAB79_06205ADQ28_00515AF497_12875AGM99_04200AHN93_04430AIT36_13065AKH62_14860AL144_02885AL168_05355AL184_05270AQ530_07215AU613_01880AVA38_05595AVC05_14855AVL16_00445AWT30_01235AXX99_02280B1265_03940B1398_17320B1642_01055B1P38_01850B2E31_05430B4V59_07320B4W90_00445B6362_01800B7Q27_03940B8Y16_08545B8Z46_00445B9C90_00580B9C96_02150B9M14_01055B9O84_01630BBQ66_02280BG493_13065BIC00_04465BIC13_01785BK110_04140BKM50_02515BMS46_02955BMU56_02280BZ203_02645BZZ88_10900C5W43_00560CA117_11665CAC56_12725CAC59_12955CB102_12865CB198_13705CB380_02205CB570_15215CBM67_02205CBM76_02205CBZ90_03990CC339_14585CC403_16150CC453_05175CC652_06360CC971_17315CCP17_04200CDZ72_09430CE70_03350CED07_02280CEQ70_10280CFF58_00560CFF59_00485CHN22_00445CIX60_03825CPS79_10125CQO33_07740CSG22_07615CVR97_21275D4422_17180D5823_05115D5O82_02275D5P17_09970D5Y28_12045D6422_01070DD95_21110DLR28_02960DMO92_09205DN165_00620DNB97_04910DNM27_09820DPB42_12995DPD91_01110DPF41_03575DPF68_02265DPS76_13885DQD22_00620DQR44_02260DRM14_02265DRT38_08630DRT61_01105DRV05_08075DSF94_11160DSG41_13180DTF68_06555DU071_03835DU223_17780DU657_01010DU879_09650DWU22_03015DY580_13850DYM27_24050E0935_07950E6W45_04070EC404_09470EEQ30_07075EHB09_09210EL822_08275ELS01_02240EQG93_11705EVY71_11030EW905_04760F0D96_00395F2P00_01490F3Q97_04965F3R12_02200F9G02_06625F9O44_11615FE758_12725FEM52_00585FGZ46_09500FJM64_02210FQC24_08325FQX78_08630G0038_14265G0040_02515G0042_06395G0045_01645G0047_01490G0048_01645G0051_01560G0052_01570G0059_02165G0061_02640G0062_01490G0063_01645G0067_01555G0069_01560G0070_01490G0071_10425G0072_12135G0074_00910G0076_05055G0077_01570G0080_01560G0084_01490G0086_01645G0087_01645G0088_00910G0089_01305G0090_00045G0094_01555G0100_01645G0101_01995G0102_02215G0111_01570G0113_11015G0117_01640G0123_01645G0124_01545G0148_01570G0157_01060G0170_01570G0A05_08050G0A28_13675G0A32_02240G0A39_02240G0A43_01980G0A46_00950G0A50_02240G0A52_02240G0A53_05920G0A56_08075G0A58_01935G0A60_02240G0A61_02240G0A63_07350G0A67_02240G0A68_02240G0A73_02220G0A79_02240G0A88_11125G0A96_02270G0A97_02240G0B03_02255G0B05_01115G0B07_11540G0B08_02260G0B12_07150G0C03_01770G0C04_03370G0C34_02290G0E15_01560G0G84_03330G0J24_10310G0J26_02250G0J27_02205G0J28_02260G0J31_12395G0J33_03055G0J34_03320G0J36_02265G0J37_13005G0J40_02265G0J43_11765G0J44_02265G0J45_02265G0J46_02835G0J47_03320G0J49_03310G0J50_14910G0J51_02255G0J53_01565G0J55_02835G0J58_02265G0J59_02250G0J62_20150G0J65_05210G0J66_01550G0J67_04595G0J69_01565G0J71_01565G0J73_02330G0J76_01575G0J79_07525G0J81_01565G0J82_12520G0J85_01565G0J89_04720G0J92_02260G0J94_15640G0J96_05190G0J97_01565G0K00_02260G0K02_02245G0K03_02265G0K04_09585G0K05_02525G0K07_01565G0K10_13525G0K13_01555G0K15_02865G0K16_04870G0K18_02560G0K19_07020G0K20_03655G0K23_02255G0K25_02800G0K26_01550G0K28_05755G0K30_04285G0K31_04580G0K32_05150G0K33_01325G0K37_02640G0K39_05860G0K41_05485G0K42_05130G0K46_01565G0K47_06525G0K48_04790G0K49_02330G0K52_07300G0K53_07845G0K56_16510G0K58_02190G0K59_04715G0K61_14095G0K65_02255G0K68_12155G0K70_01110G0K72_01555G0K74_02250G0K75_02265G0K78_01565G0K80_10345G0K83_13370G0K84_02565G0K85_14630G0K88_003999G0K89_003068G0K90_003905G0K94_004142G0K95_004185G0L00_002940G0L02_003583G0L03_18905G0L06_16135G0L07_22460G0L10_19340G0L14_20825G0L15_15045G0L18_14810G0L19_12905G0L20_12500G0L24_05730G0L25_07400G0L29_19385G0L31_12045G0L36_17450G0L37_03410G0L40_06500G0L42_20940G0L48_21670G0L49_23010G0L51_06965G0L52_03690G0L55_01900G0L59_08265G0L62_07195G0L63_06800G0L65_05720G0L67_09350G0L68_00910G0L70_06770G0L73_04015G0L76_01900G0L77_01900G0L78_00910G0L79_01905G0L83_08795G0L86_000112G0L88_14435G0L89_01870G0L91_08265G0L93_01900G0L96_01900G0L98_01900G0M00_06095G0M05_11860G0M06_000075G0M13_001696G0M14_01350G0M16_12260G0M18_003954G0M21_23350G0M22_001984G0M25_000883G0M26_06595G0M27_13350G0M28_07090G0M29_001078G0M30_13020G0M33_01655G0M35_01900G0M36_11915G0M38_08655G0M39_08705G0M41_09420G0M45_09175G0M46_002275G0M48_001584G0M53_09595G0M55_01870G0M56_05495G0M58_05500G0M63_09875G0M65_00580G0M67_01870G0N45_00910G0N48_02210G0N51_05490G0N53_02210G0N55_00910G0N57_22515G0N58_00585G0N59_01495G0N60_01005G0N61_01490G0N62_06730G0N64_00165G0N65_02210G0N66_00985G0N67_02210G0N71_00525G0N75_01490G0N78_04995G0N82_03220G0N84_01490G0N85_02205G0N86_00910G0N88_03245G0N89_01555G0N90_02205G0N92_01525G0N94_01895G0N95_02205G0N98_01485G0N99_00170G0O03_18960G0O10_01055G0O14_10070G0O15_05390G0O18_00560G0O19_01995G0O20_02215G0O22_02205G0O25_04930G0O27_00910G0O31_00910G0O32_08445G0O36_15110G0O37_11780G0O39_01490G0O40_01490G0O41_02465G0O42_02520G0O43_01560G0O44_18800G0O47_00910G0O52_00910G0O55_00625G0O57_02510G0O58_01560G0O59_10485G0O60_00910G0O63_00910G0O66_05595G0O68_01055G0O70_01560G0O71_01490G0O75_01560G0O77_01485G0O78_00910G0O80_00910G0O81_01590G0O82_01560G0O84_01560G0O85_01620G0O86_07405G0O87_06520G0O88_00075G0O89_01930G0O92_01560G0O93_01910G0O94_07735G0O97_01880G0O99_08800G0P00_09330G0P01_01595G0P05_07675G0P06_01560G0P12_07520G0P13_01560G0P17_00910G0P18_15455G0P19_01715G0P24_00515G0P26_01490G0P28_01560G0P30_01490G0P31_01560G0P36_01510G0P37_01740G0P41_03025G0P44_02635G0P45_06095G0P48_01560G0P49_04925G0P52_01560G0P53_14790G0P56_00910G0P57_01560G0P58_00910G0P63_17145G0P65_00795G0P67_05260G0P68_04000G0P69_01850G0P73_00515G0P75_10245G0P76_00145G1N61_02235G1N64_02230G1N66_02220G1N68_02220G1N71_02235G1N72_02230G1N86_02235G1N87_02235G1N91_05145G1O00_14165G1O02_02235G1O04_02235G1O05_02230G1O08_02220G1O10_01650G1O12_02235G1O16_02235G1O17_02235G1O18_02230G1O20_02235G1O23_02235G1O25_02220G1O26_02235G1O27_02220G1O28_02235G1O29_02235G1O34_02235G1O38_02220G1O40_02235G1O43_02220G1O46_12675G1O48_02235G1O49_02235G1O51_02235G1O53_02235G1O62_02235G1O63_02220G1O65_02235G1O67_02235G1O68_02235G1O69_02235G1O71_02235G1O72_02235G1O76_02235G1O77_02235G1O80_02235G1O81_02235G1O83_02235G1O84_02235G1O87_02235G1O88_02235G1O89_02235G1O90_02235G1O93_02230G1O94_02220G1O96_02235G1P02_02220G1P03_00610G1P06_02220G1P09_02220G1P10_02235G1P12_02235G1P14_03090G1P15_00245G1P17_02235G1P19_02235G1P23_02235G1P24_02235G1P25_02235G1P26_02235G1P29_00610G1P31_02220G1P35_02235G1P36_02235G1P37_00610G1P40_13045G1P44_02230G1P45_02235G1P47_02235G1P48_02235G1P51_02235G1P52_00610G1P53_00610G1P54_02235G1P55_02235G1P56_02220G1P57_02235G1P58_02220G1P59_02235G1P61_01650G1P64_02235G1P67_02235G1P69_02220G1P72_02230G1P75_02235G1P76_02220G1P78_02240G1P83_02255G1P84_02235G1P87_02225G1P90_02235G1P91_02225G1Q03_02235G1Q08_14945G1Q67_02230G1Q78_02220G1Q81_02235G1Q83_02235G1Q84_02220G1Q85_02220G1Q86_02220G1Q88_07740G1Q90_02220G1Q91_02235G1Q93_03485G1Q96_02220G1Q98_02235G1Q99_02220G1R01_02235G1R02_14160G1R03_02235G1R04_02235G1R08_02235G1R13_01790G1R15_11715G1R20_10360G1R21_01915G1R22_14605G1R23_02220G1R27_02235G1R28_02235G1R29_02235G1R30_02235G1R31_02235G1R36_02235G1R38_02235G1R42_09565G1R44_02235G1R45_02220G1R47_02235G1R51_02220G1R53_02220G1R63_02235G1R69_05585G1R87_02220G1R93_02220G1S02_02235G2203_01570G2212_02950G2218_01190G2221_20495G2279_05940G2290_08700G2793_01530G2918_04615G2951_02205G3230_000104G3231_000316G3247_001258G3248_000328G3254_000292G3263_001641G3312_000896G3336_004579G3357_001374G3433_001626G3460_000623G3464_002373G3593_000521G3V06_000382G3V14_000531G3V21_002561G3X03_000384G4189_000345G4190_000184G4192_002020G4198_000184G4201_001563G4A01_000279G4A73_000505G4A83_000298G4B68_000486G4B72_000864G4B74_000443G4D32_000016G4D46_000440G4F88_10970G4F89_13070G4F91_12730G4F92_11290G4G47_000943G4G62_004417G4G67_000411G4G68_001218G4G75_000446G4G76_000275G4G79_003256G4H04_000564G4H07_000641G4H08_001440G4H63_000089G4I66_001758G4J07_000219G4J11_002503G4J12_004855G4J18_000044G4J37_000306G4J39_004396G4J41_001805G4J45_000231G4J90_000088G4K02_000566G4K03_002506G4O54_000345G4O56_002141G4O59_001619G4O60_000382G4O69_000652G4P29_002179G4P89_000911G4P91_000416G4Q12_000387G4Q50_000107G4Q52_000107G4Q63_001953G4Q67_000583G4Q94_000545G4R02_000505G4W68_000797G4Y10_000617G9269_000104G9305_001288G9309_002044G9381_000445G9C24_004704G9C41_000382G9C46_000184G9C47_000382G9C49_000440G9C64_001160G9G03_001638G9G04_000107G9G34_000173G9G45_000310G9G50_000306G9G62_000306G9W19_001843G9W28_001384G9W45_002915G9W52_002943G9W63_001376G9X40_004525GB021_01490GB040_07730GB055_11570GB076_01380GB106_02205GB114_02205GB120_01485GB122_04690GB131_02930GB139_02210GB171_02205GB209_00115GB221_06015GB224_08920GB238_06495GB280_01560GB321_01560GB331_02210GB339_02040GB342_02400GB368_08335GB372_08815GB416_01715GB452_07845GB459_08005GB466_05390GB505_04610GB510_01090GB551_00130GB567_01185GB645_07360GBS44_05375GBS58_04715GBV53_02205GBV54_02525GBV60_01485GBW03_13410GBW44_03400GBW52_02205GBW76_00115GBX12_06560GBX20_05605GBX46_02520GBX55_01715GBX64_02505GBY23_07285GBZ51_10125GBZ55_15585GCZ80_01050GJE27_01550GNA59_001629GNA88_001544GNA97_001609GNA99_001543GNB86_000362GNC11_000440GNC19_000440GNC45_000439GNC75_000440GNC95_000441GT380_02250GTH60_01520GTH62_07525GTH63_01055GTH66_04725GTH67_01085GTH68_07055GTH70_01900GTH72_16725GTH73_01490GTH75_01560GTH77_06070GTH78_02515GTH79_14895GTH81_05235GTH85_01490GTH87_00910GTH89_04025GTH90_08675GTH91_01550GTH94_08055GTH99_06080GXC51_04140GXC56_04140GXG40_04140GYI58_02240GYI62_000382GYJ04_01065GYJ24_22920GYJ27_08770GYJ28_001084GYJ30_01490GYJ32_01570GYJ53_02235GYJ59_02235GYJ60_02220H8S97_06870JJB80_06890JJB81_06885KP44_04200NG06_17875R035_01490SE14_01404SEL4126_25200STMLT2P22_CBEKMEGD_02147ZV33_02200ZX03_06105ZY40_01800

EC: 6.1.1.20
UniProt
Find proteins for A0A0D6GBX6 (Salmonella typhimurium)
Explore A0A0D6GBX6 
Go to UniProtKB:  A0A0D6GBX6
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A0D6GBX6
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.65 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesR01GM065183
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United StatesT32AI106699
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesT32GM008602

Revision History  (Full details and data files)

  • Version 1.0: 2021-10-06
    Type: Initial release
  • Version 1.1: 2021-10-13
    Changes: Database references
  • Version 1.2: 2021-12-01
    Changes: Database references