7LS0
Structure of the Human ALK GRD bound to AUG
- PDB DOI: https://doi.org/10.2210/pdb7LS0/pdb
- Classification: TRANSFERASE/TRANSFERASE ACTIVATOR
- Organism(s): Homo sapiens
- Expression System: Trichoplusia ni
- Mutation(s): No 
- Deposited: 2021-02-17 Released: 2021-11-24 
- Funding Organization(s): National Institutes of Health/National Cancer Institute (NIH/NCI)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.05 Å
- R-Value Free: 0.288 
- R-Value Work: 0.238 
- R-Value Observed: 0.240 
This is version 1.3 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
ALK tyrosine kinase receptor fused with ALK and LTK ligand 2 | 451 | Homo sapiens | Mutation(s): 0  Gene Names: ALK, ALKAL2, FAM150B, UNQ542/PRO1097 EC: 2.7.10.1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q6UX46 (Homo sapiens) Explore Q6UX46  Go to UniProtKB:  Q6UX46 | |||||
PHAROS:  Q6UX46 GTEx:  ENSG00000189292  | |||||
Find proteins for Q9UM73 (Homo sapiens) Explore Q9UM73  Go to UniProtKB:  Q9UM73 | |||||
PHAROS:  Q9UM73 GTEx:  ENSG00000171094  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Groups | Q6UX46Q9UM73 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | G [auth D] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | |||
CIT Query on CIT | E [auth A], F [auth A] | CITRIC ACID C6 H8 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-N |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.05 Å
- R-Value Free: 0.288 
- R-Value Work: 0.238 
- R-Value Observed: 0.240 
- Space Group: P 1 21 1
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 66.262 | α = 90 |
b = 177.754 | β = 104.8 |
c = 94.855 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
XDS | data reduction |
SCALA | data scaling |
PDB_EXTRACT | data extraction |
PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2021-11-24  Deposition Author(s): Stayrook, S., Li, T., Klein, D.E.
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Cancer Institute (NIH/NCI) | United States | K22 CA215821 |
National Institutes of Health/National Cancer Institute (NIH/NCI) | United States | R01 CA248532 |
Revision History (Full details and data files)
- Version 1.0: 2021-11-24
Type: Initial release - Version 1.1: 2021-12-08
Changes: Database references - Version 1.2: 2021-12-15
Changes: Database references - Version 1.3: 2023-10-18
Changes: Data collection, Refinement description