Download MendeleyStructure of deletion mutant of alpha-glucuronidase (TM0752) from Thermotoga maritima
Manoj, N., Mohapatra, S.B.To be published.
7BR4
Structure of deletion mutant of alpha-glucuronidase (TM0752) from Thermotoga maritima
- PDB DOI: https://doi.org/10.2210/pdb7BR4/pdb
- Classification: HYDROLASE
- Organism(s): Thermotoga maritima MSB8
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2020-03-26 Released: 2021-03-31
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.233
- R-Value Work: 0.194
- R-Value Observed: 0.196
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Alpha-glucosidase, putative | 482 | Thermotoga maritima MSB8 | Mutation(s): 0 Gene Names: TM_0752 |  | |
UniProt | |||||
Find proteins for Q9WZL1 (Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)) Explore Q9WZL1 Go to UniProtKB: Q9WZL1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9WZL1 | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAI (Subject of Investigation/LOI) Query on NAI | C [auth A] | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE C21 H29 N7 O14 P2 BOPGDPNILDQYTO-NNYOXOHSSA-N |  | Ligand Interaction | |
| MN Query on MN | B [auth A] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.233
- R-Value Work: 0.194
- R-Value Observed: 0.196
- Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 75.35 | α = 90 |
| b = 80.15 | β = 102.03 |
| c = 88.86 | γ = 90 |
| Software Name | Purpose |
|---|---|
| MOSFLM | data reduction |
| Aimless | data scaling |
| PHASER | phasing |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
Entry History
Deposition Data
- Released Date: 2021-03-31 Deposition Author(s): Manoj, N., Mohapatra, S.B.
Revision History (Full details and data files)
- Version 1.0: 2021-03-31
Type: Initial release
