Engineering Specific Protein-Protein Interactions Through Halogen and Hydrogen Bonds
Rowe Hartje, R.K., Ferrero, M., Cavallo, G., Metrangolo, P., Ho, A., Czarny, R., Ho, P.S.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
GCN4-p1 peptide with TFI-F16 | 30 | Saccharomyces cerevisiae | Mutation(s): 1  | ||
UniProt | |||||
Find proteins for P03069 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P03069  Go to UniProtKB:  P03069 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03069 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
GCN4-p1 peptide with A16 | 30 | Saccharomyces cerevisiae | Mutation(s): 1  | ||
UniProt | |||||
Find proteins for P03069 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c)) Explore P03069  Go to UniProtKB:  P03069 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03069 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NA Query on NA | D [auth A], E [auth B], F [auth B], G [auth C] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
V61 Query on V61 | A | L-PEPTIDE LINKING | C9 H6 F4 I N O2 | PHE |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 59.65 | α = 90 |
b = 35.19 | β = 100.647 |
c = 47.02 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
HKL-2000 | data reduction |
Aimless | data scaling |
PDB_EXTRACT | data extraction |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
National Science Foundation (NSF, United States) | United States | 1608146 |
National Science Foundation (NSF, United States) | United States | 1905328 |