6ID1

Cryo-EM structure of a human intron lariat spliceosome after Prp43 loaded (ILS2 complex) at 2.9 angstrom resolution


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.86 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Structures of the human spliceosomes before and after release of the ligated exon.

Zhang, X.Zhan, X.Yan, C.Zhang, W.Liu, D.Lei, J.Shi, Y.

(2019) Cell Res. 29: 274-285

  • DOI: 10.1038/s41422-019-0143-x
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • Pre-mRNA splicing is executed by the spliceosome, which has eight major functional states each with distinct composition. Five of these eight human spliceosomal complexes, all preceding exon ligation, have been structurally characterized. In this stu ...

    Pre-mRNA splicing is executed by the spliceosome, which has eight major functional states each with distinct composition. Five of these eight human spliceosomal complexes, all preceding exon ligation, have been structurally characterized. In this study, we report the cryo-electron microscopy structures of the human post-catalytic spliceosome (P complex) and intron lariat spliceosome (ILS) at average resolutions of 3.0 and 2.9 Å, respectively. In the P complex, the ligated exon remains anchored to loop I of U5 small nuclear RNA, and the 3'-splice site is recognized by the junction between the 5'-splice site and the branch point sequence. The ATPase/helicase Prp22, along with the ligated exon and eight other proteins, are dissociated in the P-to-ILS transition. Intriguingly, the ILS complex exists in two distinct conformations, one with the ATPase/helicase Prp43 and one without. Comparison of these three late-stage human spliceosomes reveals mechanistic insights into exon release and spliceosome disassembly.


    Organizational Affiliation

    High Magnetic Field Laboratory, Chinese Academy of Sciences, Hefei, China.,Genetics, Genomics and Bioinformatics Program, The Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA.,Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, 92037, CA, USA.,Protein Structure Laboratory, The University of Kansas, Kansas.,Department of Biophysics, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, 100191, China; Institute of Systems Biomedicine, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, 100191, China.,State Key Laboratory of Genetic Engineering, Collaborative Innovation Center of Genetics and Development, Department of Physiology and Biophysics, School of Life Sciences, Fudan University, Shanghai 200433, China.,Biomedical Center and Center for Integrated Protein Science, Ludwig-Maximilians-University, 82152 Martinsried, Germany.,Center for Microbial Pathogenesis, Institute for Biomedical Sciences, Georgia State University, Atlanta, GA 30303, USA. Electronic address: cbasler@gsu.edu.,Institute for Stem Cell Biology and Regenerative Medicine, NCBS, GKVK Campus, Bellary Road, Bangalore, Karnataka 560 065, India.,Institut de Biologie Intégrative de la Cellule (I2BC), IBITECS, CEA, CNRS, Université Paris-Saclay, Gif-sur-Yvette, France.,Department of Pharmacology, University of Colorado School of Medicine, Aurora, CO 80045, USA.,Department of Biochemistry & Molecular Biology, The University of Georgia, Athens, Georgia, 30602, USA.,IBG-1: Biotechnology , Forschungszentrum Jülich , D-52425 Jülich , Germany.,Chemistry Department, Faculty of Science, Suez Canal University, 41522, Ismailia, Egypt.,Chemical Biology Program , Memorial Sloan Kettering Cancer Center , New York , New York 10065 , United States.,Oxford Protein Production Facility UK, Rutherford Appleton Laboratory, Oxfordshire, UK.,Science for Life Laboratory, Stockholm University, Solna, Sweden.,Gregor Mendel Institute (GMI), Austrian Academy of Sciences, Vienna Biocenter (VBC), Vienna, Austria.,Department of Optoelectronic Information, School of Science, Qilu University of Technology, Jinan, China.,Department of Bioengineering, University of Washington, Seattle, WA 98195, USA.,Department of Biochemistry and Molecular Biology, Nihon University School of Dentistry at Matsudo, Matsudo, Chiba, 271-8587, Japan.,Department of Genetics and Complex Diseases, Harvard T.H. Chan School of Public Health, Boston, MA, 02115, USA.,Cleveland Center for Membrane and Structural Biology, Case Western Reserve University, 1819 E 101st Street, Cleveland, OH, 44106, USA. pdk7@case.edu.,Biotechnology Research Division, Korea Atomic Energy Research Institute, Jeongeup, 56212, Republic of Korea; Department of Radiation Science and Technology, University of Science and Technology, Daejeon, 34113, Republic of Korea. Electronic address: mkkim@kaeri.re.kr.,Departments of Biological Chemistry and Chemistry and Biochemistry, Howard Hughes Medical Institute, UCLA-DOE Institute, UCLA, Los Angeles, CA, 90095, USA. david@mbi.ucla.edu.,Biomolecular Interaction Centre and School of Biological Sciences, University of Canterbury, Private Bag 4800, Christchurch, New Zealand.,National Laboratory for Physical Science at Microscale, School of Life Science, University of Science and Technology of China, Hefei, China.,Structural Biology & Bio-Informatics Division, CSIR-Indian Institute of Chemical Biology, 4, Raja S.C. Mullick Road, Kolkata 700 032, India.,Apoptosis and Proliferation Control Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.,BioMS - Swedish National Infrastructure for Biological Mass Spectrometry, Lund University, BMC D1330, 221 84 Lund, Sweden.,Peptide Chemistry Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.,CeSI-MeT, "G. d'Annunzio" University of Chieti-Pescara, Chieti, Italy.,School of Tropical Medicine and Global Health, Nagasaki University, Sakamoto 1-12-4, Nagasaki 852-8523, Japan; Department of Parasitology, Graduate School of Medicine, Osaka City University, Abeno-ku, Asahimachi 1-4-3, Osaka 545-8585, Japan.,Whitehead Institute for Biomedical Research and Massachusetts Institute of Technology, Department of Biology, 455 Main Street, Cambridge, Massachusetts 02142, USA.,Plant Biochemistry, Faculty of Biology & Biotechnology, Ruhr University Bochum, Bochum, Germany.,Department of Chemistry, Princeton University, Princeton, NJ 08544.,Center for Microbial Pathogenesis, Institute for Biomedical Sciences, Georgia State University, Atlanta, GA 30303, USA.,Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency (JST), Saitama, Japan. gkurisu@protein.osaka-u.ac.jp.,Howard Hughes Medical Institute, Janelia Research Campus, 19700 Helix Drive, Ashburn, Virginia 20147, USA.,Daiichi Sankyo RD Novare Co., Ltd., 1-16-13, Kitakasai, Edogawa-ku, Tokyo 134-8630, Japan.,From the Department of Neurology and Neurosurgery, Montreal Neurological Institute, McGill University, Montreal, Quebec H3A 2B4, Canada and.,Department of Chemistry, University of Florence, Via della Lastruccia 3, 50019, Sesto Fiorentino, Italy.,Department of Organismic Interactions, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.,Department of Biochemistry, Duke University Medical Center, Durham, 27710, NC, USA. seok-yong.lee@duke.edu.,Graduate School of Medical Life Science, Yokohama City University, Yokohama, Japan.,Department of Biochemistry & Molecular Biology, The University of Georgia, Athens, Georgia, 30602, USA. jprose@uga.edu.,Department of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Dortmund, Germany. stefan.raunser@mpi-dortmund.mpg.de.,R&D Division, Daiichi Sankyo Co., Ltd., 1-2-58 Hiromachi, Shinagawa-ku, Tokyo 140-8710, Japan. Electronic address: shinozuka.tsuyoshi.s5@daiichisankyo.co.jp.,Influenza Division, National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA.,Institut für Biochemie, Ernst-Moritz-Arndt-Universität Greifswald, Felix-Hausdorff-Strasse 4, 17487, Greifswald, Germany.,Department of Biology, Institute of Molecular Systems Biology, ETH Zürich, 8093, Zürich, Switzerland.,Molecular Biophysics Group, Institute of Integrative Biology, Faculty of Health and Life Sciences, University of Liverpool, Liverpool L69 7ZB, England.,Biotechnology Research Division, Korea Atomic Energy Research Institute, Jeongeup, 56212, Republic of Korea; Department of Biotechnology and Bioengineering, Interdisciplinary Program for Bioenergy and Biomaterials, Chonnam National University, Gwangju, 61186, Republic of Korea.,Cellular and Molecular Microbiology, Department of Molecular Biology, Université Libre de Bruxelles, Gosselies, Belgium.,From the Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge, CB2 1QW, United Kingdom mw240@cam.ac.uk.,Department of Applied Biology, Graduate School of Science and Technology, Kyoto Institute of Technology, Sakyo-ku, Matsugasaki, Kyoto 606-8585, Japan.,Institute of Protein Biochemistry, Ulm University, 89081, Ulm, Germany.,The University of Texas - RGV, Edinburg, Texas 78541.,Department of Diagnostic Medicine & Pathobiology, College of Veterinary Medicine, Kansas State University, Kansas.,Institute of Systems Biomedicine, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, 100191, China.,Belfer Center for Applied Cancer Science, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, USA.,Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, 250 Longwood Avenue, Boston, MA 02115, USA. harrison@crystal.harvard.edu.,Chemistry and Biochemistry Department, University of Arizona, 1041 E. Lowell Street, Biosciences West, 517, Tucson, AZ, 85721, USA.,Howard Hughes Medical Institute, Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA.,Department of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA 94158, USA; Quantitative Biosciences Institute, University of California, San Francisco, San Francisco, CA 94158, USA; J. David Gladstone Institutes, San Francisco, CA 94158, USA; Division of Infectious Diseases, Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA.,Department of Biochemistry and Biophysics, Stockholm University, 106 91, Stockholm, Sweden. hogbom@dbb.su.se.,Texas Biomedical Research Institute, San Antonio, TX 78245, USA.,Department of Immunology, Genetics, and Pathology, Uppsala University, Uppsala, SE-751 85, Sweden.,Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.,Witebsky Center for Microbial Pathogenesis and Immunology, The Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA.,School of Chemical, Materials and Biomedical Engineering, College of Engineering, The University of Georgia, Athens, GA, 30602, USA.,Department of Biochemistry and Structural Biology, University of Texas Health Science Center, San Antonio, TX 78229; clarkn@uthscsa.edu fitzpatrickp@uthscsa.edu masad.damha@mcgill.ca pjh@biochem.uthscsa.edu.,Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, 92037, CA, USA. glander@scripps.edu.,Philipps-University Marburg, Center for Synthetic Microbiology (SYNMIKRO) and Department of Chemistry, Marburg, Germany. gert.bange@synmikro.uni-marburg.de.,Department of Molecular and Cellular Parasitology, Juntendo University School of Medicine, Bunkyo-ku, Hongo 2-1-1, Tokyo, 113-8421, Japan.,Department of Chemistry, Wichita State University, Kansas.,Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115, USA.,X-ray Crystallography Core Laboratory, University of Texas Health Science Center, San Antonio, TX 78229.,Diamond Light Source, Didcot, UK. dave@strubi.ox.ac.uk.,Materials and Structural Analysis, Thermo Fisher Scientific, Eindhoven, the Netherlands.,Eli Lilly and Company, Indianapolis, Indiana.,Institute for Biological and Medical Engineering, Schools of Engineering, Medicine, and Biological Sciences, Pontificia Universidad Católica de Chile, Santiago, Chile.,Section on Biological Chemistry, NIDCR, National Institutes of Health, 30 Convent Drive, Bethesda, MD, 20892-4370, USA.,Multidiscipline Research Center, Institute of High Energy Physics Chinese Academy of Sciences, Beijing, China.,Department of Discovery Chemistry, Bristol-Myers Squibb Co., Princeton, NJ 08543.,Department of Pediatric Dentistry, Nagasaki University Graduate School of Biomedical Sciences, Nagasaki, Nagasaki, 852-8588, Japan.,Department of Biochemistry , University of Bayreuth , 95447 Bayreuth , Germany.,Department of Neurology, David Geffen School of Medicine, UCLA, Los Angeles, CA, 90095, USA.,Magnetic Resonance Center (CERM), University of Florence and Consorzio Interuniversitario Risonanze Magnetiche di, Metallo Proteine (CIRMMP), Via L. Sacconi 6, 50019, Sesto Fiorentino, Italy.,National Synchrotron Light Source-II, Brookhaven National Laboratory, Upton, NY, 11973, USA.,Department of Biochemistry and Biophysics, Stockholm University, 106 91, Stockholm, Sweden. julia.griese@icm.uu.se.,IGF, University of Montpellier, CNRS, INSERM, Montpellier, 34094, France.,Hefei National Laboratory for Physical Sciences at Microscale CAS Center for Excellence in Biomacromolecules, Collaborative Innovation Center of Chemistry for Life Sciences, and School of Life Sciences , University of Science and Technology of China , 96 Jinzhai Road , Hefei , Anhui 230026 , China.,CBS, University of Montpellier, CNRS, INSERM, Montpellier, 34090, France.,CNR Istituto di Biostrutture e Bioimmagini, Via Mezzocannone 16, I-80134 Napoli, Italy. Electronic address: luigi.vitagliano@unina.it.,Facility for Mass Spectrometry and Proteomics, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.,Graduate School of Medicine , University of Wollongong , Wollongong , NSW 2522 , Australia.,Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA.,Research Service, Louis Stokes Cleveland VA Medical Center, 10701 East Boulevard, Cleveland, OH, 44106, USA. pdk7@case.edu.,Department of Biochemistry and Biophysics, Stockholm University, 106 91, Stockholm, Sweden.,The Microbiology Group, Department of Biology, Lund University, Sölvegatan 35, 223 62 Lund, Sweden; Department of Biophysics, Faculty of Science, Cairo University, 12316 Cairo, Egypt.,Eli Lilly and Company, Advanced Photon Source, Argonne National Laboratory, Argonne, Illinois.,Key Laboratory of RNA Biology, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.,IGF, University of Montpellier, CNRS, INSERM, Montpellier, 34094, France. sebastien.granier@igf.cnrs.fr.,California Nano Systems Institute, UCLA, Los Angeles, CA, 90095, USA.,Leads Discovery and Optimization, Bristol-Myers Squibb Co., Princeton, NJ 08543.,Department of Applied Biology, Graduate School of Science and Technology, Kyoto Institute of Technology, Sakyo-ku, Matsugasaki, Kyoto 606-8585, Japan. Electronic address: tshiba@kit.ac.jp.,Technology Center for Protein Sciences, Ministry of Education Key Laboratory of Protein Sciences, School of Life Sciences, Tsinghua University, Beijing, 100084, China.,Broad Institute of Harvard and Massachusetts Institute of Technology, 7 Cambridge Center, Cambridge, Massachusetts 02142, USA.,3Department of Functional Bioscience, Section of Infection Biology, Fukuoka Dental College, Fukuoka, 814-0175 Japan.,Department of Microbiology, University of Illinois, Urbana, IL 61801, USA.,Institute of Molecular Biology and Pathology, CNR, Rome, Italy.,Department of Pharmacology, University of Colorado School of Medicine, Aurora, CO 80045, USA. Electronic address: tatiana.kutateladze@ucdenver.edu.,Department of Enzymology, Institute of Biochemistry and Biotechnology , Martin-Luther-University Halle-Wittenberg , 06120 Halle/Saale , Germany.,Department of Biochemistry, Ludwig-Maximilians-Universität München, Munich, Germany. hopfner@genzentrum.lmu.de.,Pancreatic Research Group, South Western Sydney Clinical School , University of New South Wales, and Ingham Institute for Applied Medical Research , Liverpool , NSW 2170 , Australia.,WELBIO, Brussels, Belgium. agarciap@ulb.ac.be.,Department of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA 94158, USA; Quantitative Biosciences Institute, University of California, San Francisco, San Francisco, CA 94158, USA; J. David Gladstone Institutes, San Francisco, CA 94158, USA.,Seattle Structural Genomics Center for Infectious Disease, Seattle, WA 98109.,R&D Division, Daiichi Sankyo Co., Ltd., 1-2-58 Hiromachi, Shinagawa-ku, Tokyo 140-8710, Japan.,Departments of Biochemistry and Biomolecular Chemistry, University of Wisconsin, Madison, WI 53706.,Graduate School of Pharmaceutical Sciences, The University of Tokyo, Bunkyo-ku, Hongo 7-3-1, Tokyo 113-0033, Japan.,From the Department of Biochemistry, University of Cambridge, Tennis Court Road, Cambridge, CB2 1QW, United Kingdom.,CNR Istituto di Biostrutture e Bioimmagini, Via Mezzocannone 16, I-80134 Napoli, Italy. Electronic address: luciana.esposito@cnr.it.,Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO 63105, USA.,Department of Biochemistry, Ludwig-Maximilians-Universität München, Munich, Germany.,Beijing Advanced Innovation Center for Structural Biology, Tsinghua-Peking Joint Center for Life Sciences, School of Life Sciences and School of Medicine, Tsinghua University, Beijing, 100084, China. yancy@mails.tsinghua.edu.cn.,Laboratory of Molecular Neurobiology and Biophysics and Howard Hughes Medical Institute, The Rockefeller University, 1230 York Avenue, New York, NY 10065, USA.,School of Chemistry, University of Nottingham, Nottingham, United Kingdom.,Macromolecular Crystallography, Swiss Light Source, Paul Scherrer Institut, 5232, Villigen PSI, Switzerland.,Structural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL) Heidelberg, 69117 Heidelberg, Germany.,Beryllium Discovery Corp, Bainbridge Island, WA 98110.,BIOSS Centre for Biological Signalling Studies, University of Freiburg, Freiburg, Germany.,Department of Biochemistry and Molecular biology, Vilnius University Joint Life Sciences Center, Vilnius, Lithuania.,Howard Hughes Medical Institute, Yale University, West Haven, CT 06516, USA.,Institute of Molecular Biology and Department of Chemistry and Biochemistry, University of Oregon, Eugene, OR, USA bnolen@uoregon.edu.,State Key Laboratory of Membrane Biology, Tsinghua University, Beijing 100084, China.,Key Laboratory of Structural Biology , Chinese Academy of Sciences , Hefei , Anhui 230026 , China.,Philipps-University Marburg, Center for Synthetic Microbiology (SYNMIKRO) and Department of Chemistry, Marburg, Germany.,School of Chemical, Materials and Biomedical Engineering, College of Engineering, The University of Georgia, Athens, GA, 30602, USA. yajunyan@uga.edu.,Biochemistry and Biomedicine, School of Life Sciences, University of Sussex, Falmer, Brighton, BN1 9QG, UK.,Department of Materials Science and Engineering, University of Washington, Seattle, WA 98195, USA.,Department of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, CA 94158, USA; Quantitative Biosciences Institute, University of California, San Francisco, San Francisco, CA 94158, USA; J. David Gladstone Institutes, San Francisco, CA 94158, USA. Electronic address: nevan.krogan@ucsf.edu.,Center for Integrated Protein Science Munich, Munich, Germany.,Institute of Molecular Biology and Department of Chemistry and Biochemistry, University of Oregon, Eugene, OR, USA.,Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, USA.,Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, 100871, China; Institute of Systems Biomedicine, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, 100191, China; Department of Pathology, School of Basic Medical Sciences, Peking University Health Science Center, Beijing, 100191, China. Electronic address: yinyuxin@hsc.pku.edu.cn.,Department of Applied Biology, Graduate School of Science and Technology, Kyoto Institute of Technology, Sakyo-ku, Matsugasaki, Kyoto 606-8585, Japan; Department of Biomedical Chemistry, Graduate School of Medicine, The University of Tokyo, Bunkyo-ku, Hongo 7-3-1, Tokyo 113-0033, Japan; Department of Biochemistry, Ahmadu Bello University, Zaria 2222, Nigeria.,Laboratory of Applied Structural Biology, Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Uji, Kyoto 611-0011, Japan.,2Department of Bioscience and Biotechnology, Faculty of Agriculture, Graduate School, Laboratory of Microbial Technology, Kyushu University, Fukuoka, 812-8581 Japan.,Department of Chemistry and Biotechnology, Graduate School of Engineering, Tottori University, Koyamacho-Minami 4, Tottori 680-8552, Japan.,Biotechnology Research Division, Korea Atomic Energy Research Institute, Jeongeup, 56212, Republic of Korea; Department of Radiation Science and Technology, University of Science and Technology, Daejeon, 34113, Republic of Korea.,Institute of Protein Biochemistry, Ulm University, 89081, Ulm, Germany. marcus.faendrich@uni-ulm.de.,Institut für Physikalische Biologie , Heinrich-Heine-Universität Düsseldorf , D-40225 Düsseldorf , Germany.,Institute for Cellular and Molecular Biology, The University of Texas, Austin, TX 78712.,Department of Microbiology and Oral Infection, Nagasaki University Graduate School of Biomedical Sciences, Nagasaki, Nagasaki, 852-8588, Japan.,Beijing Advanced Innovation Center for Structural Biology, Tsinghua University, Beijing 100084, China.,Center for Proteomics and Bioinformatics, Center for Synchrotron Biosciences, School of Medicine, Case Western Reserve University, 10900 Euclid Ave., Cleveland, OH, 44106-4988, USA.,Department of Cellular Biochemistry, Max Planck Institute of Biochemistry, Martinsried, Germany.,Microbial Sciences Institute, Yale University, West Haven, CT 06516, USA.,State Key Laboratory of Crystal Materials, Shandong University, Jinan 250100, China.,Eli Lilly and Company, Indianapolis, Indiana. buchananse@lilly.com.,Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden.,Beijing Advanced Innovation Center for Structural Biology, Tsinghua-Peking Joint Center for Life Sciences, School of Life Sciences and School of Medicine, Tsinghua University, Beijing, 100084, China. shi-lab@tsinghua.edu.cn.,Astbury Centre for Structural and Molecular Biology, University of Leeds, Leeds LS2 9JT, England.,Genomics Institute of the Novartis Research Foundation, San Diego, California 92121, USA.,Department of Biophysics, All India Institute of Medical Sciences, New Delhi, India. Electronic address: tpsingh.aiims@gmail.com.,NanoTemper Technologies GmbH, Floessergasse 4, Munich, 81369, Germany.,Department of Structural Biochemistry, Max Planck Institute of Molecular Physiology, Dortmund, Germany.,Institute of Molecular Enzyme Technology, Heinrich Heine University Düsseldorf , Forschungszentrum Jülich , D-52425 Jülich , Germany.,Department of Cell and Molecular Biology, Uppsala University, 751 24, Uppsala, Sweden. julia.griese@icm.uu.se.,Gene Center, Ludwig-Maximilians-Universität München, Munich, Germany.,Gene Center, Ludwig-Maximilians-Universität München, Munich, Germany. hopfner@genzentrum.lmu.de.,Department of Biochemistry, McGill University, Montreal, QC, Canada.,Department of Biochemistry & Molecular Biology, Colorado State University , 1870 Campus Delivery, Fort Collins, Colorado 80523-1870, United States.,Institute of Biochemistry and Biotechnology, Martin-Luther-University, 06120, Halle (Saale), Germany.,Dipartimento di Scienze Chimiche, Università degli Studi di Napoli "Federico II", Via Cintia, I-80126 Napoli, Italy. Electronic address: delia.picone@unina.it.,School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA 30332, USA.,Faculty of Biology, Philipps-University, Marburg, Germany.,Department of Molecular Biology and Biochemistry, University of California, 530A Steinhaus Hall, Irvine, CA 92697-3900, USA.,Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, 250 Longwood Avenue, Boston, MA 02115, USA.,Apoptosis and Proliferation Control Laboratory, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK. nic.tapon@crick.ac.uk.,Department of Biomedical Chemistry, Graduate School of Medicine, The University of Tokyo, Bunkyo-ku, Hongo 7-3-1, Tokyo 113-0033, Japan.,Department of Macromolecular Science, Graduate School of Science, Osaka, Japan.,Department of Physics, Faculty of Science, Gakushuin University, Toshima-ku, Tokyo, 171-8588, Japan.,National Joint Biomedical Engineering Research Centre on Photodynamic Technologies , Fuzhou University , Fujian 350116 , China.,Department of Microbiology and Immunology , University of Otago , Otago 9016 , New Zealand.,Dipartimento di Scienze Chimiche, della Vita, della Sostenibilità Ambientale, Università Di Parma, Parco Area delle Scienze 17/A, 43124 Parma, Italy.,GlaxoSmithKline, Collegeville Road, Collegeville, Pennsylvania 19426, United States.,Center for Integrated Protein Science, Munich, Germany. hopfner@genzentrum.lmu.de.,Department of Biochemistry, Duke University Medical Center, Durham, 27710, NC, USA.,Tsinghua-Peking Joint Center for Life Sciences, School of Life Sciences and School of Medicine, Tsinghua University, Beijing 100084, China.,Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing University of Chemical Technology, Beijing, 100029, China.,Eli Lilly and Company, Alexandria Center for Life Sciences, New York, New York.,Department of Chemistry, Princeton University, Princeton, NJ 08544; jtgroves@princeton.edu.,Max Planck Institute of Biochemistry, Martinsried, Germany.,1Division of Structural Biology, Medical Institute of Bioregulation, Kyushu University, Fukuoka, 812-8582 Japan.,6Present Address: Department of Biochemistry and Molecular Biology, University of Dhaka, Dhaka, 1000 Bangladesh.,Structural Biology - Science Technology Platform, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK. stephane.mouilleron@crick.ac.uk.,Lowe Center for Thoracic Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02215, USA.,State Key Laboratory of Chemical Resource Engineering, Beijing University of Chemical Technology, Beijing, 100029, China.,Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, CT 06511, USA.,Physical Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352, USA.,School of Tropical Medicine and Global Health, Nagasaki University, Sakamoto 1-12-4, Nagasaki 852-8523, Japan; Department of Host-Defense Biochemistry, Institute of Tropical Medicine (NEKKEN), Nagasaki University, Sakamoto 1-12-4, Nagasaki 852-8523, Japan; Department of Biomedical Chemistry, Graduate School of Medicine, The University of Tokyo, Bunkyo-ku, Hongo 7-3-1, Tokyo 113-0033, Japan. Electronic address: danielken@nagasaki-u.ac.jp.,Department of Medical, Oral and Biotechnological Sciences, "G. d'Annunzio" University of Chieti-Pescara, Chieti, Italy.,Department of Medicinal Chemistry and Molecular Pharmacology, Purdue University, West Lafayette, IN 47907, USA.,Bavarian NMR Center at the Department of Chemistry and Institute for Advanced Study, Technical University of Munich, Lichtenbergstrasse 4, 85747, Garching, Germany.,Core Research for Evolutional Science and Technology (CREST), Japan Science and Technology Agency (JST), Saitama, Japan.,Departamento de Bioquímica y Biología Estructural, Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria, Apartado Postal 70-243, Mexico City, 04510, México.,Aix-Marseille Université, AFMB UMR 7257, 13288 Marseille, France.,Institute for Protein Research, Osaka University, Osaka, Japan.,Institute for Biological and Medical Engineering, Schools of Engineering, Medicine, and Biological Sciences, Pontificia Universidad Católica de Chile, Santiago, Chile. Electronic address: cesar.ramirez@uc.cl.,Division of Structural Biology, The Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK. ren@strubi.ox.ac.uk.,Institute of Complex Systems, ICS-6: Structural Biochemistry , Forschungszentrum Jülich , D-52425 Jülich , Germany.,Department of Pharmacology, School of Medicine, Case Western Reserve University, 10900 Euclid Ave., Cleveland, OH, 44106, USA. pdk7@case.edu.,Department of Neurology, David Geffen School of Medicine, UCLA, Los Angeles, CA, 90095, USA. jianglin@ucla.edu.,Beijing Advanced Innovation Center for Soft Matter Science and Engineering, Beijing University of Chemical Technology, Beijing, 100029, China. yuanqp@mail.buct.edu.cn.,Cancer Proteomics Mass Spectrometry, Department of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet, Box 1031, 171 21, Solna, Sweden.,Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA, 20147, USA.,Structural Biology - Science Technology Platform, The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK.,Schulich Faculty of Chemistry, Technion - Israel Institute of Technology, Technion City, Haifa 32000, Israel.,Developmental Glycobiology Section, NIDCR, National Institutes of Health, 30 Convent Drive, Bethesda, MD, 20892-4370, USA. Kelly.Tenhagen@nih.gov.,5Present Address: Department of Microbiology, Faculty of Pharmacy, Misr International University, Cairo, 19648 Egypt.,Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037.,School of Cellular and Molecular Medicine, University of Bristol, UK.,Influenza Division, National Center for Immunization and Respiratory Diseases, Centers for Disease Control and Prevention, Atlanta, Georgia, USA fwb4@cdc.gov.,California Nano Systems Institute, UCLA, Los Angeles, CA, 90095, USA. hong.zhou@ucla.edu.,Technology Center for Protein Sciences, Ministry of Education Key Laboratory of Protein Sciences, School of Life Sciences, Tsinghua University, Beijing 100084, China.,Scripps Center for HIV/AIDS Vaccine Immunology & Immunogen Discovery, The Scripps Research Institute, La Jolla, CA 92037.,IGF, University of Montpellier, CNRS, INSERM, Montpellier, 34094, France. cedric.leyrat@igf.cnrs.fr.,Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02115, USA.,Collaboration for joint PhD degree between EMBL and Heidelberg University, Faculty of Biosciences.,Institute for Protein Research, Osaka University, Yamadaoka, Suita, Osaka, 565-0871, Japan.,Department of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva 84105, Israel.,Eli Lilly and Company, Discovery Chemistry Research and Technologies, Lilly Biotechnology Center, San Diego, California.,Department of Chemistry, McGill University, Montreal, QC H3A 0B8, Canada; clarkn@uthscsa.edu fitzpatrickp@uthscsa.edu masad.damha@mcgill.ca pjh@biochem.uthscsa.edu.,Department of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio. Electronic address: sotomayor.8@osu.edu.,Medical Research Center, Beijing Key Laboratory of Cardiopulmonary Cerebral Resuscitation, Beijing Chao-Yang Hospital, Capital Medical University, Beijing 100020, China.,Immuno-oncology Biology, Bristol-Myers Squibb Co., Princeton, NJ 08543.,Merck & Co., Inc., 33 Avenue Louis Pasteur, Boston, Massachusetts 02115, United States.,Department of Natural Product Biochemistry, Institute of Biochemistry and Biotechnology , Martin-Luther-University Halle-Wittenberg , 06120 Halle/Saale , Germany.,Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, CA 92037; wilson@scripps.edu mlaw@scripps.edu.,School of Molecular and Cellular Biology, Astbury Centre for Structural Molecular Biology, University of Leeds, Leeds, UK.,Department of Chemistry, McGill University, Montreal, QC H3A 0B8, Canada.,Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, ON, Canada.,Department of Molecular Biosciences, The University of Texas, Austin, TX 78712.,Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037.,Department of Organismic Interactions, Max Planck Institute for Terrestrial Microbiology, Marburg, Germany. kahmann@mpi-marburg.mpg.de.,Department of Microbiology, University of Illinois, Urbana, IL 61801, USA; Carl R. Woese Institute for Genomic Biology, University of Illinois, Urbana, IL 61801, USA.,Department of Biochemistry and Structural Biology, University of Texas Health Science Center, San Antonio, TX 78229.,Department of Biology, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA.,Department of Chemistry, University of Oxford, UK.,Department of Microbiology and Immunobiology, Harvard Medical School, Boston, MA 02115, USA.,Departments of Biological Chemistry and Chemistry and Biochemistry, Howard Hughes Medical Institute, UCLA-DOE Institute, UCLA, Los Angeles, CA, 90095, USA.,National Laboratory of Biomacromolecules, Chinese Academy of Sciences Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China.,Department of Physiology and Biophysics, University of Washington, Seattle, WA 98195, USA.,Molecular Engineering Ph.D. Program, University of Washington, Seattle, WA 98195, USA.,Department of Biophysics, All India Institute of Medical Sciences, New Delhi, India.,the Department of Biochemistry, McGill Centre for Structural Biology, McGill University, Montreal, Quebec H3G 0B1, Canada.,Howard Hughes Medical Institute, University of Washington, Seattle, WA 98195, USA.,Koch Institute for Integrative Cancer Research, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA.,National Institute for Basic Biology, Aichi, Japan.,Department of Applied Physics, Faculty of Science, Fukuoka University, Fukuoka, Japan.,Department of Microbial Pathogenesis, Yale School of Medicine, New Haven, CT 06510, USA.,Department of Rheumatology & Clinical Immunology, University of Groningen, University Medical Center Groningen, 9700 RB, Groningen, The Netherlands.,Division of Structural Biology, The Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK.,Institute for chemistry, Humboldt-Universität zu Berlin, Brook-Taylor-Str. 2, 12489, Berlin, Germany.,IMCA-CAT, Hauptman-Woodward Medical Research Institute, APS Argonne National Laboratory, Argonne, Illinois.,CNRS, AFMB UMR 7257, 13288 Marseille, France.,Present Address: Microbiology and Industrial Irradiation Division, Institute of Food and Radiation Biology, Atomic Energy Research Establishment, Ganakbari, Savar 1207, Dhaka, 1349 Bangladesh.,Biotechnology Research Division, Korea Atomic Energy Research Institute, Jeongeup, 56212, Republic of Korea; Department of Radiation Science and Technology, University of Science and Technology, Daejeon, 34113, Republic of Korea. Electronic address: saylim@kaeri.re.kr.,Division of Structural Biology, The Wellcome Centre for Human Genetics, University of Oxford, Oxford, UK. dave@strubi.ox.ac.uk.,Laboratory of Molecular Neurobiology and Biophysics and Howard Hughes Medical Institute, The Rockefeller University, 1230 York Avenue, New York, NY 10065, USA. Electronic address: mackinn@rockefeller.edu.,Center for Microbial Pathogenesis, Institute for Biomedical Sciences, Georgia State University, Atlanta, GA 30303, USA; Quantitative Biosciences Institute, University of California, San Francisco, San Francisco, CA 94158, USA; J. David Gladstone Institutes, San Francisco, CA 94158, USA.,State Key Laboratory of Chemical Resource Engineering, Beijing University of Chemical Technology, Beijing, 100029, China. yuanqp@mail.buct.edu.cn.,GlaxoSmithKline, Gunnels Wood Road, Stevenage, Hertfordshire SG1 2NY, United Kingdom.,the Department of Biochemistry, McGill Centre for Structural Biology, McGill University, Montreal, Quebec H3G 0B1, Canada kalle.gehring@mcgill.ca.,Institute of Infection and Immunity, Cardiff University, UK.,Structural Biology & Bio-Informatics Division, CSIR-Indian Institute of Chemical Biology, 4, Raja S.C. Mullick Road, Kolkata 700 032, India. Electronic address: jayati@iicb.res.in.,Developmental Glycobiology Section, NIDCR, National Institutes of Health, 30 Convent Drive, Bethesda, MD, 20892-4370, USA.,Department of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, MI, USA.,University of Chinese Academy of Sciences, Beijing, China.,Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037.,Department of Biochemistry, University of Washington, Seattle, WA 98195, USA.,Department of Veterans Affairs, South Texas Veterans Health Care System, San Antonio, TX 78229.,Department of Chemistry, Fudan University, Shanghai, China.,Department of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio.,Beijing Advanced Innovation Center for Structural Biology, Tsinghua-Peking Joint Center for Life Sciences, School of Life Sciences and School of Medicine, Tsinghua University, Beijing, 100084, China.,Department of Biochemistry and Biophysics, Stockholm University, Stockholm, Sweden. martin.ott@dbb.su.se.,Institute for Protein Design, University of Washington, Seattle, WA 98195, USA. jaf18@uw.edu dabaker@uw.edu.,School of Chemistry, University of Leeds, Leeds LS2 9JT, England.,From the Department of Chemistry, California State University, Fresno, California 93740 cbrooks@csufresno.edu.,Department of Chemistry & Physics, University of South Carolina Aiken, Aiken, SC 29811.,Department of Pharmacology, School of Medicine, Case Western Reserve University, 10900 Euclid Ave., Cleveland, OH, 44106, USA.,Department of Functional Bioscience, Infection Biology, Fukuoka Dental College, Matsudo, Tamura, Sawara, Fukuoka, 814-0913, Japan.,Dipartimento di Scienze Chimiche, Università degli Studi di Napoli "Federico II", Via Cintia, I-80126 Napoli, Italy.,Department of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA. Electronic address: eortlun@emory.edu.,Northeastern Collaborative Access Team, Department of Chemistry and Chemical Biology, Cornell University, Ithaca, NY 14853.,National Center for Protein Science, Shanghai, China.,Department of Biotechnology and Bioengineering, Interdisciplinary Program for Bioenergy and Biomaterials, Chonnam National University, Gwangju, 61186, Republic of Korea.,International AIDS Vaccine Initiative Neutralizing Antibody Center and the Collaboration for AIDS Vaccine Discovery, The Scripps Research Institute, La Jolla, CA 92037.,Department of Biochemistry and Biophysics, 2011 Agriculture and Life Sciences Building, Oregon State University, Corvallis, Oregon 97331.,From the Department of Chemistry, California State University, Fresno, California 93740.,Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, 100871, China.,State Key Laboratory of Microbial Metabolism, School of Life Sciences & Biotechnology, Shanghai Jiao Tong University, China.,Department of Chemistry, University of Liverpool, Liverpool L69 7ZD, England.,Structural Biochemistry - Department of Chemistry, Philipps University Marburg, Hans-Meerwein Strasse 4, 35032 Marburg, Germany.,Key Laboratory of Structural Biology, School of Life Sciences, University of Science and Technology of China, Hefei, China.,The Microbiology Group, Department of Biology, Lund University, Sölvegatan 35, 223 62 Lund, Sweden. Electronic address: claes.von_wachenfeldt@biol.lu.se.,Laboratorio Nacional de Genómica para la Biodiversidad, Centro de Investigación y de Estudios Avanzados del IPN, Apartado Postal 629, Irapuato, Guanajuato, CP 36821, México.,Department of Biochemistry, Emory University School of Medicine, Atlanta, GA 30322, USA.,Institute for Protein Design, University of Washington, Seattle, WA 98195, USA.,National Laboratory of Macromolecules, Institute of Biophysics, Chinese Academy of Science, Beijing, China.,Synthesis and Solid State Pharmaceutical Centre (SSPC), School of Chemistry, University College Dublin, Dublin, Ireland.,Eli Lilly and Company, Lilly Research Laboratories, Avenida de la Industria, Alcobendas, Spain.,Department of Microbiology, Immunology and Molecular Genetics, UCLA, Los Angeles, CA, 90095, USA. hong.zhou@ucla.edu.,Department of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, USA.,Department of Biochemistry and Structural Biology, Lund University, PO Box 124, 221 00 Lund, Sweden.,Molecular Biophysics Unit, Indian Institute of Science, Bangalore, India.,The Microbiology Group, Department of Biology, Lund University, Sölvegatan 35, 223 62 Lund, Sweden; Department of Biochemistry and Structural Biology, Lund University, PO Box 124, 221 00 Lund, Sweden.,Institute of Protein Biochemistry, Ulm University, 89081, Ulm, Germany. matthias.schmidt@uni-ulm.de.,Department of Neurology, Huashan Hospital, Fudan University, Shanghai 200040, China.,Howard Hughes Medical Institute, Harvard University, 250 Longwood Avenue, Boston, MA 02115, USA.,Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States.,Illawarra Health & Medical Research Institute , Wollongong , NSW 2522 , Australia.,Department of Macromolecular Science, Graduate School of Science, Osaka, Japan. gkurisu@protein.osaka-u.ac.jp.,Department of Radiochemistry, Bristol-Myers Squibb Co., Princeton, NJ 08543.,Institute of Structural Biology, Helmholtz Zentrum München, Ingolstädter Landstrasse 1, 85764, Neuherberg, Germany.,The Pirbright Institute, Pirbright, UK.,Cellular and Molecular Microbiology, Department of Molecular Biology, Université Libre de Bruxelles, Gosselies, Belgium. agarciap@ulb.ac.be.,Systems and Structural Biology Center, RIKEN, Tsurumi, Suehiro 1-7-22, Yokohama, Kanagawa 230-0045, Japan.,Molecular Horizons and School of Chemistry & Molecular Bioscience , University of Wollongong , Wollongong , NSW 2522 , Australia.,Skaggs Graduate School of Chemical and Biological Sciences, The Scripps Research Institute, La Jolla, 92037, CA, USA.,Molecular Biology of Archaea, Institute of Biology II, University of Freiburg, 79104 Freiburg, Germany.,State Key Laboratory of Membrane Biology, Tsinghua University, Beijing 100084, China. nyan@princeton.edu.,Institute for Biological and Medical Engineering, Schools of Engineering, Medicine, and Biological Sciences, Pontificia Universidad Católica de Chile, Santiago, Chile; Department of Chemical and Bioprocesses Engineering, School of Engineering, Pontificia Universidad Católica de Chile, Santiago, Chile. Electronic address: lparraa@ing.puc.cl.,Department of Medical Chemistry, Institute of Pharmacy , Martin-Luther-University Halle-Wittenberg , 06120 Halle/Saale , Germany.,School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, England.,Laboratorio de Investigación Bioquímica, Programa Institucional en Biomedicina Molecular ENMyH-Instituto Politécnico Nacional, Guillermo Massieu Helguera No. 239, La Escalera Ticoman, D.F, Mexico City, 07320, Mexico.,Tri-Institutional PhD Program in Chemical Biology , Memorial Sloan Kettering Cancer Center , New York , New York 10065 , United States.,Schulich Faculty of Chemistry, Technion - Israel Institute of Technology, Technion City, Haifa 32000, Israel. Electronic address: noam@ch.technion.ac.il.,School of Tropical Medicine and Global Health, Nagasaki University, Sakamoto 1-12-4, Nagasaki 852-8523, Japan; Department of Biomedical Chemistry, Graduate School of Medicine, The University of Tokyo, Bunkyo-ku, Hongo 7-3-1, Tokyo 113-0033, Japan; Department of Host-Defense Biochemistry, Institute of Tropical Medicine (NEKKEN), Nagasaki University, Sakamoto 1-12-4, Nagasaki 852-8523, Japan.,Department of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA 92037; wilson@scripps.edu mlaw@scripps.edu.,Department of Virology and Immunology, Texas Biomedical Research Institute, San Antonio, TX 78245, USA.,CNR Istituto di Biostrutture e Bioimmagini, Via Mezzocannone 16, I-80134 Napoli, Italy.,Department of Medical Cell Biology, Uppsala University, SE-75123, Uppsala, Sweden.,Institute for Protein Research, Osaka University, Osaka, Japan. gkurisu@protein.osaka-u.ac.jp.,Department of Biochemistry, The Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA.,State Key Laboratory of Genetic Engineering, Collaborative Innovation Center of Genetics and Development, Department of Biochemistry, School of Life Sciences, Fudan University, Shanghai 200433, China.,School of Life Sciences, Westlake University, 18 Shilongshan Road, Xihu District, Hangzhou, Zhejiang, 310024, China. shi-lab@tsinghua.edu.cn.,Molecular Discovery Technologies, Bristol-Myers Squibb Co., Princeton, NJ 08543.,Department of Chemistry, Franklin and Marshall College, PO Box 3003, Lancaster, PA 17604, USA.




Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Pre-mRNA-processing-splicing factor 8
A
2335Homo sapiensMutation(s): 0 
Gene Names: PRPF8 (PRPC8)
Find proteins for Q6P2Q9 (Homo sapiens)
Go to Gene View: PRPF8
Go to UniProtKB:  Q6P2Q9
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
116 kDa U5 small nuclear ribonucleoprotein component
C
972Homo sapiensMutation(s): 0 
Gene Names: EFTUD2 (KIAA0031, SNRP116)
Find proteins for Q15029 (Homo sapiens)
Go to Gene View: EFTUD2
Go to UniProtKB:  Q15029
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
U5 small nuclear ribonucleoprotein 40 kDa protein
E
357Homo sapiensMutation(s): 0 
Gene Names: SNRNP40 (PRP8BP, SFP38, WDR57)
Find proteins for Q96DI7 (Homo sapiens)
Go to Gene View: SNRNP40
Go to UniProtKB:  Q96DI7
Entity ID: 6
MoleculeChainsSequence LengthOrganismDetails
Crooked neck-like protein 1
J
848Homo sapiensMutation(s): 0 
Gene Names: CRNKL1 (CRN)
Find proteins for Q9BZJ0 (Homo sapiens)
Go to Gene View: CRNKL1
Go to UniProtKB:  Q9BZJ0
Entity ID: 7
MoleculeChainsSequence LengthOrganismDetails
Cell division cycle 5-like protein
L
802Homo sapiensMutation(s): 0 
Gene Names: CDC5L (KIAA0432, PCDC5RP)
Find proteins for Q99459 (Homo sapiens)
Go to Gene View: CDC5L
Go to UniProtKB:  Q99459
Entity ID: 8
MoleculeChainsSequence LengthOrganismDetails
Pre-mRNA-splicing factor SYF2
M
243Homo sapiensMutation(s): 0 
Gene Names: SYF2 (CBPIN, GCIPIP)
Find proteins for O95926 (Homo sapiens)
Go to Gene View: SYF2
Go to UniProtKB:  O95926
Entity ID: 9
MoleculeChainsSequence LengthOrganismDetails
Protein BUD31 homolog
N
144Homo sapiensMutation(s): 0 
Gene Names: BUD31 (EDG2)
Find proteins for P41223 (Homo sapiens)
Go to Gene View: BUD31
Go to UniProtKB:  P41223
Entity ID: 10
MoleculeChainsSequence LengthOrganismDetails
Pre-mRNA-splicing factor RBM22
O
420Homo sapiensMutation(s): 0 
Gene Names: RBM22 (ZC3H16)
Find proteins for Q9NW64 (Homo sapiens)
Go to Gene View: RBM22
Go to UniProtKB:  Q9NW64
Entity ID: 11
MoleculeChainsSequence LengthOrganismDetails
Spliceosome-associated protein CWC15 homolog
P
229Homo sapiensMutation(s): 0 
Gene Names: CWC15 (C11orf5)
Find proteins for Q9P013 (Homo sapiens)
Go to Gene View: CWC15
Go to UniProtKB:  Q9P013
Entity ID: 12
MoleculeChainsSequence LengthOrganismDetails
SNW domain-containing protein 1
R
536Homo sapiensMutation(s): 0 
Gene Names: SNW1 (SKIIP, SKIP)
Find proteins for Q13573 (Homo sapiens)
Go to Gene View: SNW1
Go to UniProtKB:  Q13573
Entity ID: 13
MoleculeChainsSequence LengthOrganismDetails
Peptidyl-prolyl cis-trans isomerase-like 1
S
166Homo sapiensMutation(s): 0 
Gene Names: PPIL1 (CYPL1)
EC: 5.2.1.8
Find proteins for Q9Y3C6 (Homo sapiens)
Go to Gene View: PPIL1
Go to UniProtKB:  Q9Y3C6
Entity ID: 14
MoleculeChainsSequence LengthOrganismDetails
Pleiotropic regulator 1
T
514Homo sapiensMutation(s): 0 
Gene Names: PLRG1
Find proteins for O43660 (Homo sapiens)
Go to Gene View: PLRG1
Go to UniProtKB:  O43660
Entity ID: 15
MoleculeChainsSequence LengthOrganismDetails
Pre-mRNA-processing factor 17
W
579Homo sapiensMutation(s): 0 
Gene Names: CDC40 (EHB3, PRP17, PRPF17)
Find proteins for O60508 (Homo sapiens)
Go to Gene View: CDC40
Go to UniProtKB:  O60508
Entity ID: 18
MoleculeChainsSequence LengthOrganismDetails
CWF19-like protein 2
U
894Homo sapiensMutation(s): 0 
Gene Names: CWF19L2
Find proteins for Q2TBE0 (Homo sapiens)
Go to Gene View: CWF19L2
Go to UniProtKB:  Q2TBE0
Entity ID: 19
MoleculeChainsSequence LengthOrganismDetails
Small nuclear ribonucleoprotein Sm D3
a, h
126Homo sapiensMutation(s): 0 
Gene Names: SNRPD3
Find proteins for P62318 (Homo sapiens)
Go to Gene View: SNRPD3
Go to UniProtKB:  P62318
Entity ID: 20
MoleculeChainsSequence LengthOrganismDetails
Small nuclear ribonucleoprotein-associated protein
b, i
231Homo sapiensMutation(s): 0 
Gene Names: SNRPB (COD, SNRPB1)
Find proteins for P14678 (Homo sapiens)
Go to Gene View: SNRPB
Go to UniProtKB:  P14678
Entity ID: 21
MoleculeChainsSequence LengthOrganismDetails
Small nuclear ribonucleoprotein Sm D1
c, j
119Homo sapiensMutation(s): 0 
Gene Names: SNRPD1
Find proteins for P62314 (Homo sapiens)
Go to Gene View: SNRPD1
Go to UniProtKB:  P62314
Entity ID: 22
MoleculeChainsSequence LengthOrganismDetails
Small nuclear ribonucleoprotein Sm D2
d, k
118Homo sapiensMutation(s): 0 
Gene Names: SNRPD2 (SNRPD1)
Find proteins for P62316 (Homo sapiens)
Go to Gene View: SNRPD2
Go to UniProtKB:  P62316
Entity ID: 23
MoleculeChainsSequence LengthOrganismDetails
Small nuclear ribonucleoprotein F
f, m
86Homo sapiensMutation(s): 0 
Gene Names: SNRPF (PBSCF)
Find proteins for P62306 (Homo sapiens)
Go to Gene View: SNRPF
Go to UniProtKB:  P62306
Entity ID: 24
MoleculeChainsSequence LengthOrganismDetails
Small nuclear ribonucleoprotein E
e, l
92Homo sapiensMutation(s): 0 
Gene Names: SNRPE
Find proteins for P62304 (Homo sapiens)
Go to Gene View: SNRPE
Go to UniProtKB:  P62304
Entity ID: 25
MoleculeChainsSequence LengthOrganismDetails
Small nuclear ribonucleoprotein G
g, n
76Homo sapiensMutation(s): 0 
Gene Names: SNRPG (PBSCG)
Find proteins for P62308 (Homo sapiens)
Go to Gene View: SNRPG
Go to UniProtKB:  P62308
Entity ID: 26
MoleculeChainsSequence LengthOrganismDetails
Pre-mRNA-processing factor 19
q, r, s, t
504Homo sapiensMutation(s): 0 
Gene Names: PRPF19 (NMP200, PRP19, SNEV)
EC: 2.3.2.27
Find proteins for Q9UMS4 (Homo sapiens)
Go to Gene View: PRPF19
Go to UniProtKB:  Q9UMS4
Entity ID: 27
MoleculeChainsSequence LengthOrganismDetails
Pre-mRNA-splicing factor SPF27
K
225Homo sapiensMutation(s): 0 
Gene Names: BCAS2 (DAM1)
Find proteins for O75934 (Homo sapiens)
Go to Gene View: BCAS2
Go to UniProtKB:  O75934
Entity ID: 28
MoleculeChainsSequence LengthOrganismDetails
Pre-mRNA-splicing factor SYF1
I
855Homo sapiensMutation(s): 0 
Gene Names: XAB2 (HCNP, KIAA1177, SYF1)
Find proteins for Q9HCS7 (Homo sapiens)
Go to Gene View: XAB2
Go to UniProtKB:  Q9HCS7
Entity ID: 29
MoleculeChainsSequence LengthOrganismDetails
RNA helicase aquarius
Q
1485Homo sapiensMutation(s): 0 
Gene Names: AQR (KIAA0560)
EC: 3.6.4.13
Find proteins for O60306 (Homo sapiens)
Go to Gene View: AQR
Go to UniProtKB:  O60306
Entity ID: 30
MoleculeChainsSequence LengthOrganismDetails
Peptidyl-prolyl cis-trans isomerase E
y
301Homo sapiensMutation(s): 0 
Gene Names: PPIE (CYP33)
EC: 5.2.1.8
Find proteins for Q9UNP9 (Homo sapiens)
Go to Gene View: PPIE
Go to UniProtKB:  Q9UNP9
Entity ID: 31
MoleculeChainsSequence LengthOrganismDetails
U2 small nuclear ribonucleoprotein A'
o
255Homo sapiensMutation(s): 0 
Gene Names: SNRPA1
Find proteins for P09661 (Homo sapiens)
Go to Gene View: SNRPA1
Go to UniProtKB:  P09661
Entity ID: 32
MoleculeChainsSequence LengthOrganismDetails
U2 small nuclear ribonucleoprotein B''
p
225Homo sapiensMutation(s): 0 
Gene Names: SNRPB2
Find proteins for P08579 (Homo sapiens)
Go to Gene View: SNRPB2
Go to UniProtKB:  P08579
Entity ID: 33
MoleculeChainsSequence LengthOrganismDetails
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
V
795Homo sapiensMutation(s): 0 
Gene Names: DHX15 (DBP1, DDX15)
EC: 3.6.4.13
Find proteins for O43143 (Homo sapiens)
Go to Gene View: DHX15
Go to UniProtKB:  O43143
Entity ID: 2
MoleculeChainsLengthOrganism
U5snRNAB117Homo sapiens
Entity ID: 5
MoleculeChainsLengthOrganism
U6snRNAF107Homo sapiens
Entity ID: 16
MoleculeChainsLengthOrganism
pre-mRNAG272Homo sapiens
Entity ID: 17
MoleculeChainsLengthOrganism
U2snRNAH188Homo sapiens
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
I6P
Query on I6P

Download SDF File 
Download CCD File 
A
INOSITOL 1,2,3,4,5,6-HEXAKISPHOSPHATE
MYO-INOSITOL HEXAKISPHOSPHATE
C6 H18 O24 P6
IMQLKJBTEOYOSI-GPIVLXJGSA-N
 Ligand Interaction
ZN
Query on ZN

Download SDF File 
Download CCD File 
N, O, U
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
GTP
Query on GTP

Download SDF File 
Download CCD File 
C
GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
 Ligand Interaction
MG
Query on MG

Download SDF File 
Download CCD File 
C, F
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
SEP
Query on SEP
R
L-PEPTIDE LINKINGC3 H8 N O6 PSER
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.86 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of ChinaChina31621092
National Natural Science Foundation of ChinaChina31430020

Revision History 

  • Version 1.0: 2019-03-13
    Type: Initial release
  • Version 1.1: 2019-04-17
    Type: Data collection, Database references