6FDT

NMR structure of the second TPR domain of the human RPAP3 protein in complex with HSP70 peptide SGPTIEEVD


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest restraint energy 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Deep Structural Analysis of RPAP3 and PIH1D1, Two Components of the HSP90 Co-chaperone R2TP Complex.

Henri, J.Chagot, M.E.Bourguet, M.Abel, Y.Terral, G.Maurizy, C.Aigueperse, C.Georgescauld, F.Vandermoere, F.Saint-Fort, R.Behm-Ansmant, I.Charpentier, B.Pradet-Balade, B.Verheggen, C.Bertrand, E.Meyer, P.Cianferani, S.Manival, X.Quinternet, M.

(2018) Structure 26: 1196-1209.e8

  • DOI: 10.1016/j.str.2018.06.002
  • Primary Citation of Related Structures:  
    6FD7, 6FDP, 6FDT, 6GXZ

  • PubMed Abstract: 
  • RPAP3 and PIH1D1 are part of the HSP90 co-chaperone R2TP complex involved in the assembly process of many molecular machines. In this study, we performed a deep structural investigation of the HSP binding abilities of the two TPR domains of RPAP3. We combined 3D NMR, non-denaturing MS, and ITC techniques with Y2H, IP-LUMIER, FRET, and ATPase activity assays and explain the fundamental role played by the second TPR domain of RPAP3 in the specific recruitment of HSP90 ...

    RPAP3 and PIH1D1 are part of the HSP90 co-chaperone R2TP complex involved in the assembly process of many molecular machines. In this study, we performed a deep structural investigation of the HSP binding abilities of the two TPR domains of RPAP3. We combined 3D NMR, non-denaturing MS, and ITC techniques with Y2H, IP-LUMIER, FRET, and ATPase activity assays and explain the fundamental role played by the second TPR domain of RPAP3 in the specific recruitment of HSP90. We also established the 3D structure of an RPAP3:PIH1D1 sub-complex demonstrating the need for a 34-residue insertion, specific of RPAP3 isoform 1, for the tight binding of PIH1D1. We also confirm the existence of a complex lacking PIH1D1 in human cells (R2T), which shows differential binding to certain clients. These results highlight similarities and differences between the yeast and human R2TP complexes, and document the diversification of this family of co-chaperone complexes in human.


    Organizational Affiliation

    Université de Lorraine, CNRS, INSERM, IBSLor, 54000 Nancy, France. Electronic address: marc.quinternet@univ-lorraine.fr.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
RNA polymerase II-associated protein 3A120Homo sapiensMutation(s): 0 
Gene Names: RPAP3
UniProt & NIH Common Fund Data Resources
Find proteins for Q9H6T3 (Homo sapiens)
Explore Q9H6T3 
Go to UniProtKB:  Q9H6T3
PHAROS:  Q9H6T3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9H6T3
Protein Feature View
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  • Reference Sequence

Find similar proteins by:  Sequence   |   3D Structure  

Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Heat shock 70 kDa protein 1BB9Homo sapiensMutation(s): 0 
Gene Names: HSPA1BHSP72
UniProt & NIH Common Fund Data Resources
Find proteins for P0DMV9 (Homo sapiens)
Explore P0DMV9 
Go to UniProtKB:  P0DMV9
PHAROS:  P0DMV9
Entity Groups  
UniProt GroupP0DMV9
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 200 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest restraint energy 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
French National Research AgencyFranceANR-11-BSV8-01503

Revision History  (Full details and data files)

  • Version 1.0: 2018-08-01
    Type: Initial release
  • Version 1.1: 2018-09-12
    Changes: Data collection, Database references
  • Version 1.2: 2019-05-08
    Changes: Data collection