6BX9

Solution structure of conotoxin reg3b

  • Classification: TOXIN
  • Organism(s): Conus regius
  • Mutation(s): No 

  • Deposited: 2017-12-18 Released: 2018-01-24 
  • Deposition Author(s): Mari, F., Dovell, S.
  • Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS), Florida Sea Grant College Program

Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation   3D Report Full Report


This is version 1.5 of the entry. See complete history


Literature

Structural plasticity of mini-M conotoxins - expression of all mini-M subtypes by Conus regius.

Franco, A.Dovell, S.Moller, C.Grandal, M.Clark, E.Mari, F.

(2018) FEBS J 285: 887-902

  • DOI: https://doi.org/10.1111/febs.14372
  • Primary Citation of Related Structures:  
    6BX9

  • PubMed Abstract: 

    The mini-M conotoxins are peptidic scaffolds found in the venom of cones snails. These scaffolds are tightly folded structures held together by three disulfide bonds with a CC-C-C-CC arrangement (conotoxin framework III) and belong to the M Superfamily of conotoxins. Here, we describe mini-M conotoxins from the venom of Conus regius, a Western Atlantic worm-hunting cone snail species using transcriptomic and peptidomic analyses. These C. regius conotoxins belong to three different subtypes: M1, M2, and M3. The subtypes show little sequence homology, and their loop sizes (intercysteine amino acid chains) vary significantly. The mini-Ms isolated from dissected venom contains preferentially hydroxylated proline residues, thus augmenting the structural reach of this conotoxin class. Using 2D-NMR methods, we have determined the 3D structure of reg3b, an M2 subtype conotoxin, which shows a constrained multi-turn scaffold. The structural diversity found within mini-M conotoxin scaffolds of C. regius is indicative of structural hypervariability of the conotoxin M superfamily that is not seen in other superfamilies. These stable minimalistic scaffolds may be investigated for the development of engineered peptides for therapeutic applications.


  • Organizational Affiliation

    Department of Chemistry and Biochemistry, Florida Atlantic University, Boca Raton, FL, USA.


Macromolecules

Find similar proteins by:  Sequence   |   3D Structure  

Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Conotoxin15Conus regiusMutation(s): 0 
UniProt
Find proteins for P85021 (Conus regius)
Explore P85021 
Go to UniProtKB:  P85021
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP85021
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: structures with the lowest energy 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM 066004
Florida Sea Grant College ProgramUnited StatesR/LR-MB-18
Florida Sea Grant College ProgramUnited StatesR/LR-MB-74

Revision History  (Full details and data files)

  • Version 1.0: 2018-01-24
    Type: Initial release
  • Version 1.1: 2018-01-31
    Changes: Database references
  • Version 1.2: 2018-02-14
    Changes: Author supporting evidence, Database references
  • Version 1.3: 2018-03-21
    Changes: Database references
  • Version 1.4: 2020-01-01
    Changes: Author supporting evidence, Data collection
  • Version 1.5: 2023-06-14
    Changes: Database references, Derived calculations, Other