6XY7

Human SHIP1 with magnesium and phosphate bound to the active site


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.09 Å
  • R-Value Free: 0.159 
  • R-Value Work: 0.136 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.1 of the entry. See complete history


Literature

Human SHIP1 with magnesium and phosphate bound to the active site

Bradshaw, W.J.Scacioc, A.Fernandez-Cid, A.Mckinley, G.Burgess-Brown, N.A.von Delft, F.Arrowsmith, C.H.Edwards, A.M.Bountra, C.Gileadi, O.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1A [auth AAA]463Homo sapiensMutation(s): 0 
Gene Names: INPP5DSHIPSHIP1
EC: 3.1.3.86 (PDB Primary Data), 3.1.3.56 (PDB Primary Data), 3.1.3.36 (PDB Primary Data)
UniProt & NIH Common Fund Data Resources
Find proteins for Q92835 (Homo sapiens)
Explore Q92835 
Go to UniProtKB:  Q92835
PHAROS:  Q92835
GTEx:  ENSG00000168918 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ92835
Protein Feature View
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  • Reference Sequence
Small Molecules
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.09 Å
  • R-Value Free: 0.159 
  • R-Value Work: 0.136 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 62.5α = 90
b = 79.088β = 90
c = 89.255γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
DIALSdata reduction
STARANISOdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute on Aging (NIH/NIA)United States1U54AG065187-01

Revision History  (Full details and data files)

  • Version 1.0: 2020-02-26
    Type: Initial release
  • Version 1.1: 2020-11-11
    Changes: Source and taxonomy