The structure of penicillin-binding protein 2 from Yersinia pestis
Pankov, G.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Peptidoglycan D,D-transpeptidase MrdA | A [auth BBB], B [auth AAA] | 583 | Yersinia pestis | Mutation(s): 0  Gene Names: mrdA, YPO2604 EC: 3.4.16.4 | |
UniProt | |||||
Find proteins for A0A0H2W2Y2 (Yersinia pestis) Explore A0A0H2W2Y2  Go to UniProtKB:  A0A0H2W2Y2 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A0H2W2Y2 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TLA Query on TLA | C [auth AAA] | L(+)-TARTARIC ACID C4 H6 O6 FEWJPZIEWOKRBE-JCYAYHJZSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
O2E Query on O2E | A [auth BBB], B [auth AAA] | L-PEPTIDE LINKING | C25 H32 N4 O9 S | SER |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 56.265 | α = 90 |
b = 147.772 | β = 90 |
c = 164.523 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
XDS | data reduction |
STARANISO | data scaling |
PHASES | phasing |