6XL1

crystal structure of cA4-activated Cad1(D294N)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.202 
  • R-Value Work: 0.178 
  • R-Value Observed: 0.179 

wwPDB Validation   3D Report Full Report



Literature

crystal structure of cA4-activated Cad1

Rostol, J.Xie, W.Patel, D.J.Marraffini, L.

To be published.

Macromolecules

Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Cad1AB382Treponema succinifaciens DSM 2489Mutation(s): 1 
Gene Names: Tresu_2185
Find proteins for F2NWD3 (Treponema succinifaciens (strain ATCC 33096 / DSM 2489 / 6091))
Explore F2NWD3 
Go to UniProtKB:  F2NWD3
Protein Feature View
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  • Reference Sequence
  • Find similar nucleic acids by:  Sequence   |   Structure
  • Entity ID: 2
    MoleculeChainsLengthOrganismImage
    cA4C4synthetic construct
    Small Molecules
    Ligands 2 Unique
    IDChainsName / Formula / InChI Key2D Diagram3D Interactions
    EPE
    Query on EPE

    Download Ideal Coordinates CCD File 
    B
    4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
    C8 H18 N2 O4 S
    JKMHFZQWWAIEOD-UHFFFAOYSA-N
     Ligand Interaction
    MN
    Query on MN

    Download Ideal Coordinates CCD File 
    A, B
    MANGANESE (II) ION
    Mn
    WAEMQWOKJMHJLA-UHFFFAOYSA-N
     Ligand Interaction
    Experimental Data & Validation

    Experimental Data

    • Method: X-RAY DIFFRACTION
    • Resolution: 1.95 Å
    • R-Value Free: 0.202 
    • R-Value Work: 0.178 
    • R-Value Observed: 0.179 
    • Space Group: P 41 21 2
    Unit Cell:
    Length ( Å )Angle ( ˚ )
    a = 111.946α = 90
    b = 111.946β = 90
    c = 172.18γ = 90
    Software Package:
    Software NamePurpose
    PHENIXrefinement
    PHENIXrefinement
    autoXDSdata reduction
    autoXDSdata scaling
    PHASERphasing

    Structure Validation

    View Full Validation Report



    Entry History 

    Deposition Data

    Revision History 

    • Version 1.0: 2020-12-30
      Type: Initial release