Cryo-EM structure of NPF-bound human Arp2/3 complex and activation mechanism.
Zimmet, A., Van Eeuwen, T., Boczkowska, M., Rebowski, G., Murakami, K., Dominguez, R.(2020) Sci Adv 6: eaaz7651-eaaz7651
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
(2020) Sci Adv 6: eaaz7651-eaaz7651
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Actin-related protein 3 | 418 | Homo sapiens | Mutation(s): 0  Gene Names: ACTR3, ARP3 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P61158 (Homo sapiens) Explore P61158  Go to UniProtKB:  P61158 | |||||
PHAROS:  P61158 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P61158 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Actin-related protein 2 | 394 | Homo sapiens | Mutation(s): 0  Gene Names: ACTR2, ARP2 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P61160 (Homo sapiens) Explore P61160  Go to UniProtKB:  P61160 | |||||
PHAROS:  P61160 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P61160 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Actin-related protein 2/3 complex subunit 1B | 372 | Homo sapiens | Mutation(s): 0  Gene Names: ARPC1B, ARC41 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O15143 (Homo sapiens) Explore O15143  Go to UniProtKB:  O15143 | |||||
PHAROS:  O15143 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O15143 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 4 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Actin-related protein 2/3 complex subunit 2 | 300 | Homo sapiens | Mutation(s): 0  Gene Names: ARPC2, ARC34, PRO2446 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O15144 (Homo sapiens) Explore O15144  Go to UniProtKB:  O15144 | |||||
PHAROS:  O15144 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O15144 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 5 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Actin-related protein 2/3 complex subunit 3 | 203 | Homo sapiens | Mutation(s): 0  Gene Names: ARPC3, ARC21 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O15145 (Homo sapiens) Explore O15145  Go to UniProtKB:  O15145 | |||||
PHAROS:  O15145 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O15145 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 6 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Actin-related protein 2/3 complex subunit 4 | 168 | Homo sapiens | Mutation(s): 0  Gene Names: ARPC4, ARC20 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P59998 (Homo sapiens) Explore P59998  Go to UniProtKB:  P59998 | |||||
PHAROS:  P59998 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P59998 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 7 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Actin-related protein 2/3 complex subunit 5 | 151 | Homo sapiens | Mutation(s): 0  Gene Names: ARPC5, ARC16 | ![]() | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O15511 (Homo sapiens) Explore O15511  Go to UniProtKB:  O15511 | |||||
PHAROS:  O15511 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O15511 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 8 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Neural Wiskott-Aldrich syndrome protein | 501 | Mus musculus | Mutation(s): 0  Gene Names: Wasl | ![]() | |
UniProt | |||||
Find proteins for Q91YD9 (Mus musculus) Explore Q91YD9  Go to UniProtKB:  Q91YD9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q91YD9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ATP Query on ATP | K [auth A], M [auth B] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N | |||
MG Query on MG | J [auth A], L [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Task | Software Package | Version |
---|---|---|
RECONSTRUCTION | cryoSPARC | 2.9.0 |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R01-GM07391 |
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | T32-GM008275 |
National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI) | United States | F31-HL146077 |