6UHC
CryoEM structure of human Arp2/3 complex with bound NPFs
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Actin/HSP70 | 8094240 | 4000313 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Actin-like ATPases | 8094241 | 3000092 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Actin-like ATPases | 8094242 | 3000092 | SCOP2 (2022-06-29) |
C | SCOP2 Family | WD40-repeat | 8094324 | 4002744 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | WD40 repeat-like | 8094325 | 3001694 | SCOP2 (2022-06-29) |
E | SCOP2 Family | Arp2/3 complex 21 kDa subunit ARPC3 | 8093591 | 4002866 | SCOP2 (2022-06-29) |
E | SCOP2 Superfamily | Arp2/3 complex 21 kDa subunit ARPC3 | 8093592 | 3001830 | SCOP2 (2022-06-29) |
F | SCOP2 Family | Arp2/3 complex subunits | 8093617 | 4003389 | SCOP2 (2022-06-29) |
F | SCOP2 Superfamily | Arp2/3 complex subunits | 8093618 | 3000751 | SCOP2 (2022-06-29) |
G | SCOP2 Family | Arp2/3 complex 16 kDa subunit ARPC5 | 8093721 | 4002906 | SCOP2 (2022-06-29) |
G | SCOP2 Superfamily | Arp2/3 complex 16 kDa subunit ARPC5 | 8093722 | 3001882 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00022 | e6uhcA2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
B | PF00022 | e6uhcB1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00022 | ECOD (1.6) |
C | PF00400 | e6uhcC1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: PF00400 | ECOD (1.6) |
D | PF04045 | e6uhcD2 | A: a+b two layers | X: Type III secretory system chaperone-like | H: Arp2/3 complex subunits (From Topology) | T: Arp2/3 complex subunits | F: PF04045 | ECOD (1.6) |
E | PF04062 | e6uhcE1 | A: alpha bundles | X: Arp2/3 complex 21 kDa subunit ARPC3 (From Topology) | H: Arp2/3 complex 21 kDa subunit ARPC3 (From Topology) | T: Arp2/3 complex 21 kDa subunit ARPC3 | F: PF04062 | ECOD (1.6) |
F | PF05856 | e6uhcF1 | A: a+b two layers | X: Type III secretory system chaperone-like | H: Arp2/3 complex subunits (From Topology) | T: Arp2/3 complex subunits | F: PF05856 | ECOD (1.6) |
G | PF04699 | e6uhcG1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Arp2/3 complex 16 KDa subunit ARPC5 (From Topology) | T: Arp2/3 complex 16 KDa subunit ARPC5 | F: PF04699 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C | 2.130.10.10 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (utative) |
D | 3.30.1460.20 | Alpha Beta | 2-Layer Sandwich | Yope Regulator | Chain: A, | CATH (utative) |
E | 1.10.1760.10 | Mainly Alpha | Orthogonal Bundle | Arp2/3 complex 21 kDa subunit ARPC3 | Actin-related protein 2/3 complex subunit 3 | CATH (utative) |
F | 3.30.1460.20 | Alpha Beta | 2-Layer Sandwich | Yope Regulator | Chain: A, | CATH (utative) |
G | 1.25.40.190 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Actin-related protein 2/3 complex subunit 5 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00022 | Actin (Actin) | Actin | - | Family | |
PF00022 | Actin (Actin) | Actin | - | Family | |
PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat | |
PF04045 | Arp2/3 complex, 34 kD subunit p34-Arc (P34-Arc) | Arp2/3 complex, 34 kD subunit p34-Arc | - | Family | |
PF04062 | ARP2/3 complex ARPC3 (21 kDa) subunit (P21-Arc) | ARP2/3 complex ARPC3 (21 kDa) subunit | - | Family | |
PF05856 | ARP2/3 complex 20 kDa subunit (ARPC4) (ARPC4) | ARP2/3 complex 20 kDa subunit (ARPC4) | - | Family | |
PF04699 | ARP2/3 complex 16 kDa subunit (p16-Arc) (P16-Arc) | ARP2/3 complex 16 kDa subunit (p16-Arc) | The Arp2/3 protein complex has been implicated in the control of actin polymerisation. The human complex consists of seven subunits which include the actin related proteins Arp2 and Arp3, and five others referred to as p41-Arc, p34-Arc, p21-Arc, p20 ... | Domain | |