6TSJ

Crystal structure of human L ferritin (HuLf) Fe(III)-loaded for 15 minutes


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.195 

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Literature

Iron Biomineral Growth from the Initial Nucleation Seed in L-Ferritin.

Ciambellotti, S.Pozzi, C.Mangani, S.Turano, P.

(2020) Chemistry 26: 5770-5773

  • DOI: https://doi.org/10.1002/chem.202000064
  • Primary Citation of Related Structures:  
    6TR9, 6TRZ, 6TS0, 6TS1, 6TSA, 6TSF, 6TSJ, 6TSS, 6TSX

  • PubMed Abstract: 
  • X-ray structures of homopolymeric human L-ferritin and horse spleen ferritin were solved by freezing protein crystals at different time intervals after exposure to a ferric salt and revealed the growth of an octa-nuclear iron cluster on the inner surface of the protein cage with a key role played by some glutamate residues ...

    X-ray structures of homopolymeric human L-ferritin and horse spleen ferritin were solved by freezing protein crystals at different time intervals after exposure to a ferric salt and revealed the growth of an octa-nuclear iron cluster on the inner surface of the protein cage with a key role played by some glutamate residues. An atomic resolution view of how the cluster formation develops starting from a (μ 3 -oxo)tris[(μ 2 -glutamato-κO:κO')](glutamato-κO)(diaquo)triiron(III) seed is provided. The results support the idea that iron biomineralization in ferritin is a process initiating at the level of the protein surface, capable of contributing coordination bonds and electrostatic guidance.


    Organizational Affiliation

    Department of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, 50019, Italy.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Ferritin light chainA [auth AAA]175Homo sapiensMutation(s): 0 
Gene Names: FTL
UniProt & NIH Common Fund Data Resources
Find proteins for P02792 (Homo sapiens)
Explore P02792 
Go to UniProtKB:  P02792
PHAROS:  P02792
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP02792
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.30 Å
  • R-Value Free: 0.262 
  • R-Value Work: 0.195 
  • Space Group: I 4 3 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 151.907α = 90
b = 151.907β = 90
c = 151.907γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata reduction
SCALAdata scaling
MOLREPphasing

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2020-02-19
    Type: Initial release
  • Version 1.1: 2020-05-20
    Changes: Database references