6RHD

Crystal structure of the amyloid-like TSYVGV segment from the Candida albicans Agglutinin-like protein (Adhesin) 5

• PDB DOI: https://doi.org/10.2210/pdb6RHD/pdb

• Classification: PROTEIN FIBRIL
• Organism(s): Candida albicans
• Mutation(s): No 


• Deposited: 2019-04-19 Released: 2020-03-25 
• Deposition Author(s): Landau, M., Perov, S.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.20 Å
• R-Value Free: 0.127 
• R-Value Work: 0.106 
• R-Value Observed: 0.108 

Literature

Amyloid structures from a Candida albicans adhesin Structure and conservation of amyloid spines from fungal adhesins

Perov, S., Landau, M., Lipke, P.N.

To be published.

Biological Assembly 1  

Global Symmetry: Helical - H  (Explore in 3D)
Global Stoichiometry: Homo 36-mer - A36 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: scanning transmission electron microscopy

Macromolecule Content

• Total Structure Weight: 0.62 kDa 
• Atom Count: 51 
• Modelled Residue Count: 6 
• Deposited Residue Count: 6 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Agglutinin-like protein 5	A [auth B]	6	Candida albicans	Mutation(s): 0
UniProt
Find proteins for O13368 (Candida albicans) Explore O13368  Go to UniProtKB:  O13368

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.20 Å
• R-Value Free: 0.127 
• R-Value Work: 0.106 
• R-Value Observed: 0.108 
• Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 11.77	α = 90
b = 9.36	β = 95.08
c = 16.79	γ = 90

Software Package:

Software Name	Purpose
XDS	data reduction
XSCALE	data scaling
PHASER	phasing
REFMAC	refinement
PDB_EXTRACT	data extraction

Structure Validation

Entry History 

Deposition Data

• Released Date: 2020-03-25 
Deposition Author(s): Landau, M., Perov, S.

Revision History  

• Version 1.0: 2020-03-25
  Type: Initial release