6RHB | pdb_00006rhb

Crystal structure of the amyloid-like IATLYV segment from the Candida albicans Agglutinin-like protein (Adhesin) 5

PDB DOI: https://doi.org/10.2210/pdb6RHB/pdb

Classification: PROTEIN FIBRIL
Organism(s): Candida albicans
Mutation(s): No

Deposited: 2019-04-19 Released: 2020-03-25
Deposition Author(s): Landau, M., Perov, S.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.26 Å
R-Value Free:
0.104 (Depositor), 0.100 (DCC)
R-Value Work:
0.100 (Depositor), 0.100 (DCC)
R-Value Observed:
0.100 (Depositor)

Starting Model: other
View more details

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Amyloid structures from a Candida albicans adhesin Structure and conservation of amyloid spines from fungal adhesins

Perov, S., Landau, M., Lipke, P.N.

To be published.

Macromolecule Content

Total Structure Weight: 0.68 kDa
Atom Count: 49
Modeled Residue Count: 6
Deposited Residue Count: 6
Unique protein chains: 1

Macromolecules

Find similar proteins by: Sequence | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Agglutinin-like protein 5	A [auth B]	6	Candida albicans	Mutation(s): 0
UniProt
Find proteins for O13368 (Candida albicans) Explore O13368 Go to UniProtKB: O13368
Entity Groups
UniProt Group	O13368
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.26 Å
R-Value Free: 0.104 (Depositor), 0.100 (DCC)
R-Value Work: 0.100 (Depositor), 0.100 (DCC)
R-Value Observed: 0.100 (Depositor)

Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 9.49	α = 90
b = 17.87	β = 90
c = 22.42	γ = 90

Software Package:

Software Name	Purpose
XDS	data reduction
XSCALE	data scaling
PHASER	phasing
REFMAC	refinement
PDB_EXTRACT	data extraction

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2020-03-25

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2020-03-25
Type: Initial release
Version 1.1: 2024-05-01
Changes: Data collection, Database references, Refinement description

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.