6QNN

CLATHRIN HEAVY CHAIN N-TERMINAL DOMAIN BOUND TO GTSE1 LIDL MOTIF


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.284 
  • R-Value Work: 0.240 
  • R-Value Observed: 0.242 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Clathrin's adaptor interaction sites are repurposed to stabilize microtubules during mitosis.

Rondelet, A.Lin, Y.C.Singh, D.Porfetye, A.T.Thakur, H.C.Hecker, A.Brinkert, P.Schmidt, N.Bendre, S.Muller, F.Mazul, L.Widlund, P.O.Bange, T.Hiller, M.Vetter, I.R.Bird, A.W.

(2020) J Cell Biol 219

  • DOI: https://doi.org/10.1083/jcb.201907083
  • Primary Citation of Related Structures:  
    6QNN, 6QNP

  • PubMed Abstract: 

    Clathrin ensures mitotic spindle stability and efficient chromosome alignment, independently of its vesicle trafficking function. Although clathrin localizes to the mitotic spindle and kinetochore fiber microtubule bundles, the mechanisms by which clathrin stabilizes microtubules are unclear. We show that clathrin adaptor interaction sites on clathrin heavy chain (CHC) are repurposed during mitosis to directly recruit the microtubule-stabilizing protein GTSE1 to the spindle. Structural analyses reveal that these sites interact directly with clathrin-box motifs on GTSE1. Disruption of this interaction releases GTSE1 from spindles, causing defects in chromosome alignment. Surprisingly, this disruption destabilizes astral microtubules, but not kinetochore-microtubule attachments, and chromosome alignment defects are due to a failure of chromosome congression independent of kinetochore-microtubule attachment stability. GTSE1 recruited to the spindle by clathrin stabilizes microtubules by inhibiting the microtubule depolymerase MCAK. This work uncovers a novel role of clathrin adaptor-type interactions to stabilize nonkinetochore fiber microtubules to support chromosome congression, defining for the first time a repurposing of this endocytic interaction mechanism during mitosis.


  • Organizational Affiliation

    Max Planck Institute of Molecular Physiology, Dortmund, Germany.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Clathrin heavy chain 1364Homo sapiensMutation(s): 0 
Gene Names: CLTCCLH17CLTCL2KIAA0034
UniProt & NIH Common Fund Data Resources
Find proteins for Q00610 (Homo sapiens)
Explore Q00610 
Go to UniProtKB:  Q00610
PHAROS:  Q00610
GTEx:  ENSG00000141367 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ00610
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
G2 and S phase-expressed protein 166Homo sapiensMutation(s): 0 
Gene Names: GTSE1
UniProt & NIH Common Fund Data Resources
Find proteins for Q9NYZ3 (Homo sapiens)
Explore Q9NYZ3 
Go to UniProtKB:  Q9NYZ3
PHAROS:  Q9NYZ3
GTEx:  ENSG00000075218 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9NYZ3
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.284 
  • R-Value Work: 0.240 
  • R-Value Observed: 0.242 
  • Space Group: P 43
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 51.987α = 90
b = 51.987β = 90
c = 154.094γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XSCALEdata scaling
PDB_EXTRACTdata extraction
XDSdata reduction
PHASERphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2019-08-28
    Type: Initial release
  • Version 1.1: 2020-03-11
    Changes: Database references
  • Version 1.2: 2024-01-24
    Changes: Data collection, Database references, Refinement description