6PY8

Crystal structure of the RBPJ-NOTCH1-NRARP ternary complex bound to DNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.754 Å
  • R-Value Free: 0.315 
  • R-Value Work: 0.267 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Molecular basis for feedback inhibition of Notch signaling by the Notch regulated ankyrin repeat protein NRARP

Jarrett, S.M.Seegar, T.C.M.Andrews, M.Adelmant, G.Marto, J.A.Aster, J.C.Blacklow, S.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Notch-regulated ankyrin repeat-containing protein
B, H, G
114Homo sapiensMutation(s): 0 
Gene Names: NRARP
Find proteins for Q7Z6K4 (Homo sapiens)
Go to Gene View: NRARP
Go to UniProtKB:  Q7Z6K4
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
Recombining binding protein suppressor of hairless
C, E
444Homo sapiensMutation(s): 0 
Gene Names: RBPJ (IGKJRB, IGKJRB1, RBPJK, RBPSUH)
Find proteins for Q06330 (Homo sapiens)
Go to Gene View: RBPJ
Go to UniProtKB:  Q06330
Entity ID: 5
MoleculeChainsSequence LengthOrganismDetails
Neurogenic locus notch homolog protein 1
F, K
369Homo sapiensMutation(s): 0 
Gene Names: NOTCH1 (TAN1)
Find proteins for P46531 (Homo sapiens)
Go to Gene View: NOTCH1
Go to UniProtKB:  P46531
Entity ID: 2
MoleculeChainsLengthOrganism
DNAA,X16Homo sapiens
Entity ID: 3
MoleculeChainsLengthOrganism
DNAD,Y16Homo sapiens
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.754 Å
  • R-Value Free: 0.315 
  • R-Value Work: 0.267 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 79.880α = 90.00
b = 103.650β = 90.00
c = 301.420γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata scaling
XDSdata processing
PHASERphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Human Genome Research InstituteUnited StatesR35 CA220340

Revision History 

  • Version 1.0: 2019-08-14
    Type: Initial release