6PWG

Ewingella americana HopBF1 kinase bound to AMP-PNP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.89 Å
  • R-Value Free: 0.241 
  • R-Value Work: 0.206 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

A bacterial effector mimics a host HSP90 client to undermine immunity

Lopez, V.A.Park, B.C.Kamrowska, D.Sreelatha, A.Zembek, P.Fernandez, J.Servage, K.A.Gradowski, M.Hennig, J.Tomchick, D.R.Pawlowski, K.Krzymowska, M.Tagliabracci, V.S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Type III effector HopBF1
A, B
204Ewingella americanaMutation(s): 0 
Find proteins for A0A2N0N2I2 (Ewingella americana)
Go to UniProtKB:  A0A2N0N2I2
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ANP
Query on ANP

Download SDF File 
Download CCD File 
A, B
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
C10 H17 N6 O12 P3
PVKSNHVPLWYQGJ-KQYNXXCUSA-N
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
A, B
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.89 Å
  • R-Value Free: 0.241 
  • R-Value Work: 0.206 
  • Space Group: H 3 2
Unit Cell:
Length (Å)Angle (°)
a = 76.185α = 90.00
b = 76.185β = 90.00
c = 351.362γ = 120.00
Software Package:
Software NamePurpose
HKL-3000data reduction
PHENIXphasing
Cootmodel building
HKL-3000data scaling
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of Dental and Craniofacial ResearchUnited StatesR00DK099254
Robert A. Welch FoundationUnited StatesI-1911
Cancer Prevention and Research Institute of TexasUnited StatesRP170674
Polish National Science CentrePoland2014/15/B/NZ1/03559
Polish National Science CentrePoland2017/25/B/NZ1/01883

Revision History 

  • Version 1.0: 2019-09-11
    Type: Initial release