6PVV

RNase A in complex with p5A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.223 
  • R-Value Work: 0.192 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Nucleoside Tetra- and Pentaphosphates Prepared Using a Tetraphosphorylation Reagent are Potent Inhibitors of Ribonuclease A

Shepard, S.M.Windsor, I.W.Raines, R.T.Cummins, C.C.

(2019) J.Am.Chem.Soc. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ribonuclease pancreatic
A, B
124Bos taurusMutation(s): 0 
Gene Names: RNASE1 (RNS1)
EC: 4.6.1.18
Find proteins for P61823 (Bos taurus)
Go to Gene View: RNASE1
Go to UniProtKB:  P61823
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
5FA
Query on 5FA

Download SDF File 
Download CCD File 
A, B
ADENOSINE-5'-PENTAPHOSPHATE
C10 H18 N5 O19 P5
WYJWVZZCMBUPSP-KQYNXXCUSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.223 
  • R-Value Work: 0.192 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 99.790α = 90.00
b = 32.250β = 90.30
c = 71.950γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
PHASERphasing
SADABSdata scaling
PDB_EXTRACTdata extraction
SAINTdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Cancer InstituteUnited StatesR01 CA073808

Revision History 

  • Version 1.0: 2019-11-06
    Type: Initial release