6NXL

Ubiquitin binding variants


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.803 Å
  • R-Value Free: 0.265 
  • R-Value Work: 0.213 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

A Protein Engineering Approach for Uncovering Cryptic Ubiquitin-binding Sites: from a Ubiquitin-Variant Inhibitor of APC/C to K48 Chain Binding

Watson, E.R.Grace, C.R.R.Zhang, W.Miller, D.J.Davidson, I.F.Prabu, J.R.Yu, S.Bolhuis, D.L.Haselbach, D.Stark, H.Peters, J.-M.Brown, N.G.Sidhu, S.S.Schulman, B.A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Polyubiquitin-B
A, B, C, D, E, F, G, H
80Homo sapiensMutation(s): 0 
Gene Names: UBB
Find proteins for B4DV12 (Homo sapiens)
Go to Gene View: UBB
Go to UniProtKB:  B4DV12
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.803 Å
  • R-Value Free: 0.265 
  • R-Value Work: 0.213 
  • Space Group: P 41
Unit Cell:
Length (Å)Angle (°)
a = 62.359α = 90.00
b = 62.359β = 90.00
c = 168.121γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
DENZOdata reduction
PHASERphasing
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2020-01-15
    Type: Initial release