6NQS

Crystal structure of fast switching M159T mutant of fluorescent protein Dronpa (Dronpa2)- Y63(3-OMeY)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.214 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Electrostatic control of isomerization pathways in proteins

Romei, M.G.Lin, C.-Y.Mathews, I.I.Boxer, S.G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Fluorescent protein Dronpa
A, B, C, D, E, F, G, H
255Echinophyllia sp. SC22Mutation(s): 2 
Gene Names: Dronpa
Find proteins for Q5TLG6 (Echinophyllia sp. SC22)
Go to UniProtKB:  Q5TLG6
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
KXV
Query on KXV
A, B, C, D, E, F, G, H
L-peptide linkingC15 H17 N3 O5 S

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Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.214 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 82.396α = 90.00
b = 86.489β = 94.96
c = 144.082γ = 90.00
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XDSdata scaling
PHENIXphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical SciencesUnited States27738
National Institutes of Health/National Institute of General Medical SciencesUnited States118044

Revision History 

  • Version 1.0: 2019-06-12
    Type: Initial release