6NOH

Crystal structure of FBF-2 repeat 5 mutant (C363S, R364Y, Q367S) in complex with 8-nt RNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.249 Å
  • R-Value Free: 0.206 
  • R-Value Work: 0.159 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Engineering a conserved RNA regulatory protein repurposes its biological functionin vivo.

Bhat, V.D.McCann, K.L.Wang, Y.Fonseca, D.R.Shukla, T.Alexander, J.C.Qiu, C.Wickens, M.Lo, T.W.Tanaka Hall, T.M.Campbell, Z.T.

(2019) Elife 8: --


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Fem-3 mRNA-binding factor 2
A
413Caenorhabditis elegansMutation(s): 3 
Gene Names: fbf-2
Find proteins for Q09312 (Caenorhabditis elegans)
Go to UniProtKB:  Q09312
Entity ID: 2
MoleculeChainsLengthOrganism
RNA (5'-R(*UP*GP*UP*AP*AP*AP*UP*A)-3')B8Caenorhabditis elegans
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download SDF File 
Download CCD File 
A, B
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.249 Å
  • R-Value Free: 0.206 
  • R-Value Work: 0.159 
  • Space Group: P 61
Unit Cell:
Length (Å)Angle (°)
a = 96.397α = 90.00
b = 96.397β = 90.00
c = 99.853γ = 120.00
Software Package:
Software NamePurpose
PHENIXrefinement
PHASERphasing
PDB_EXTRACTdata extraction
HKL-2000data reduction
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-01-30
    Type: Initial release