6M1V

Crystal structure of post fusion core of 2019-nCoV S2 subunit


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.212 
  • R-Value Work: 0.203 
  • R-Value Observed: 0.204 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structural basis of HCoV-19 fusion core and an effective inhibition peptide against virus entry.

Sun, H.Li, Y.Liu, P.Qiao, C.Wang, X.Wu, L.Liu, K.Hu, Y.Su, C.Tan, S.Zou, S.Wu, G.Yan, J.Gao, G.F.Qi, J.Wang, Q.

(2020) Emerg Microbes Infect 9: 1238-1241


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Spike protein S2,Spike protein S2A119Severe acute respiratory syndrome coronavirus 2Mutation(s): 0 
Gene Names: S2
UniProt
Find proteins for P0DTC2 (Severe acute respiratory syndrome coronavirus 2)
Explore P0DTC2 
Go to UniProtKB:  P0DTC2
Protein Feature View
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.212 
  • R-Value Work: 0.203 
  • R-Value Observed: 0.204 
  • Space Group: P 3 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 42.666α = 90
b = 42.666β = 90
c = 106.648γ = 120
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling
PHASERphasing

Structure Validation

View Full Validation Report




Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2020-06-03
    Type: Initial release
  • Version 1.1: 2021-02-03
    Changes: Advisory, Database references, Source and taxonomy, Structure summary