6LBL

Crystal structure of IMP-1 metallo-beta-lactamase in complex with NO9 inhibitor


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.68 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.158 

wwPDB Validation 3D Report Full Report



Literature

Crystal structure of IMP-1 metallo-beta-lactamase in complex with NO9 inhibitor

Wachino, J.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Metallo-beta-lactamase type 2A228Serratia marcescensMutation(s): 0 
EC: 3.5.2.6
Find proteins for P52699 (Serratia marcescens)
Explore P52699 
Go to UniProtKB:  P52699
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NO9
Query on NO9

Download CCD File 
A
2,5-dimethyl-4-sulfamoyl-furan-3-carboxylic acid
C7 H9 N O5 S
YPWRJNLSEWKOGW-UHFFFAOYSA-N
 Ligand Interaction
ZN
Query on ZN

Download CCD File 
A
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
NA
Query on NA

Download CCD File 
A
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.68 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.158 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 35.92α = 90
b = 56.61β = 90
c = 100.62γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
iMOSFLMdata reduction
SCALAdata scaling
MOLREPphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

  • Deposited Date: 2019-11-14 
  • Released Date: 2020-02-19 
  • Deposition Author(s): Wachino, J.

Revision History 

  • Version 1.0: 2020-02-19
    Type: Initial release