6KHQ

bacterial cystathionine gamma-lyase MccB of Staphylococcus aureus with cofactor PLP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.249 
  • R-Value Work: 0.203 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal Structure of Bacterial Cystathionine Gamma-Lyase in The Cysteine Biosynthesis Pathway of Staphylococcus aureus

Lee, D.Jeong, S.Ahn, J.Ha, N.-C.Kwon, A.-R.

(2019) Crystals 9: 656-656


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Cystathionine gamma lyase
A, B
397Staphylococcus aureus (strain Mu50 / ATCC 700699)Mutation(s): 0 
Gene Names: yrhB
Find proteins for A0A0H3JQ19 (Staphylococcus aureus (strain Mu50 / ATCC 700699))
Go to UniProtKB:  A0A0H3JQ19
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
LLP
Query on LLP
A, B
L-PEPTIDE LINKINGC14 H22 N3 O7 PLYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.249 
  • R-Value Work: 0.203 
  • Space Group: P 42 21 2
Unit Cell:
Length (Å)Angle (°)
a = 132.281α = 90.00
b = 132.281β = 90.00
c = 97.954γ = 90.00
Software Package:
Software NamePurpose
HKL-2000data scaling
PHENIXrefinement
MxDCdata collection
MOLREPphasing
PHENIXmodel building
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2019-07-16 
  • Released Date: 2020-03-25 
  • Deposition Author(s): Ha, N.-C., Lee, D.

Revision History 

  • Version 1.0: 2020-03-25
    Type: Initial release