6J0N

Cryo-EM Structure of an Extracellular Contractile Injection System, baseplate in extended state, refined in C6 symmetry


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.5 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Cryo-EM Structure and Assembly of an Extracellular Contractile Injection System.

Jiang, F.Li, N.Wang, X.Cheng, J.Huang, Y.Yang, Y.Yang, J.Cai, B.Wang, Y.P.Jin, Q.Gao, N.

(2019) Cell 177: 370-383.e15


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Pvc9
D, E, F, G, H, I
140Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)Mutation(s): 0 
Find proteins for B6VNN6 (Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77))
Go to UniProtKB:  B6VNN6
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Pvc11
J, K, L, M, N, O
728Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)Mutation(s): 0 
Find proteins for B6VNN4 (Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77))
Go to UniProtKB:  B6VNN4
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
Pvc12
P, Q, R, S, T, U
950Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)Mutation(s): 0 
Find proteins for B6VNN3 (Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77))
Go to UniProtKB:  B6VNN3
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
Pvc4
V, W, X, Y, Z, a
410Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)Mutation(s): 0 
Find proteins for B6VNP1 (Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77))
Go to UniProtKB:  B6VNP1
Entity ID: 5
MoleculeChainsSequence LengthOrganismDetails
Pvc7
b, c, d, e, f, g
229Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)Mutation(s): 0 
Find proteins for B6VNN8 (Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77))
Go to UniProtKB:  B6VNN8
Entity ID: 6
MoleculeChainsSequence LengthOrganismDetails
Pvc2
h, i, j, k, l, m
355Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)Mutation(s): 0 
Find proteins for B6VNP3 (Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77))
Go to UniProtKB:  B6VNP3
Entity ID: 7
MoleculeChainsSequence LengthOrganismDetails
Pvc5
n, o, p, q, r, s
152Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)Mutation(s): 0 
Find proteins for B6VNP0 (Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77))
Go to UniProtKB:  B6VNP0
Entity ID: 8
MoleculeChainsSequence LengthOrganismDetails
Pvc1
1, 2, 3, 4, 5, z
149Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)Mutation(s): 0 
Find proteins for B6VNP4 (Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77))
Go to UniProtKB:  B6VNP4
Entity ID: 9
MoleculeChainsSequence LengthOrganismDetails
Pvc3
t, u, v, w, x, y
440Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)Mutation(s): 0 
Find proteins for B6VNP2 (Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77))
Go to UniProtKB:  B6VNP2
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.5 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of ChinaChina--

Revision History 

  • Version 1.0: 2019-04-10
    Type: Initial release
  • Version 1.1: 2019-04-17
    Type: Data collection, Database references