6J0N | pdb_00006j0n

Cryo-EM Structure of an Extracellular Contractile Injection System, baseplate in extended state, refined in C6 symmetry

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X [auth a]	Ig_3	e6j0na1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
W [auth Z]	Ig_3	e6j0nZ1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
V [auth Y]	Ig_3	e6j0nY1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
U [auth X]	Ig_3	e6j0nX1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
T [auth W]	Ig_3	e6j0nW1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
S [auth V]	Ig_3	e6j0nV1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
ZA [auth x]	AAA_lid_3	e6j0nx1	A: alpha bundles	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Family A G protein-coupled receptor-like	F: AAA_lid_3	ECOD (develop294)
YA [auth w]	AAA_lid_3	e6j0nw1	A: alpha bundles	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Family A G protein-coupled receptor-like	F: AAA_lid_3	ECOD (develop294)
XA [auth v]	AAA_lid_3	e6j0nv1	A: alpha bundles	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Family A G protein-coupled receptor-like	F: AAA_lid_3	ECOD (develop294)
WA [auth u]	AAA_lid_3	e6j0nu1	A: alpha bundles	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Family A G protein-coupled receptor-like	F: AAA_lid_3	ECOD (develop294)
VA [auth t]	AAA_lid_3	e6j0nt1	A: alpha bundles	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Family A G protein-coupled receptor-like	F: AAA_lid_3	ECOD (develop294)
AB [auth y]	AAA_lid_3	e6j0ny1	A: alpha bundles	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: Family A G protein-coupled receptor-like	F: AAA_lid_3	ECOD (develop294)
UA [auth 5]	Ig_3	e6j0n51	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
TA [auth 4]	Ig_3	e6j0n41	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
SA [auth 3]	Ig_3	e6j0n31	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
RA [auth 2]	Ig_3	e6j0n21	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
QA [auth 1]	Ig_3	e6j0n11	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
BB [auth z]	Ig_3	e6j0nz1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
PA [auth s]	Ig_3	e6j0ns1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
OA [auth r]	Ig_3	e6j0nr1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
NA [auth q]	Ig_3	e6j0nq1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
MA [auth p]	Ig_3	e6j0np1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
LA [auth o]	Ig_3	e6j0no1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
KA [auth n]	Ig_3	e6j0nn1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
JA [auth m]	Ig_3	e6j0nm1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
IA [auth l]	Ig_3	e6j0nl1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
HA [auth k]	Ig_3	e6j0nk1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
GA [auth j]	Ig_3	e6j0nj1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
FA [auth i]	Ig_3	e6j0ni1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
EA [auth h]	Ig_3	e6j0nh1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
F [auth I]	Ig_3	e6j0nI1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
E [auth H]	Ig_3	e6j0nH1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
D [auth G]	Ig_3	e6j0nG1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
C [auth F]	Ig_3	e6j0nF1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
B [auth E]	Ig_3	e6j0nE1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)
A [auth D]	Ig_3	e6j0nD1	A: alpha bundles	X: PriB N-terminal domain-like	H: Aconitase iron-sulfur domain	T: Aconitase iron-sulfur domain	F: Ig_3	ECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
S [auth V], T [auth W], U [auth X], V [auth Y], W [auth Z], S [auth V], T [auth W], U [auth X], V [auth Y], W [auth Z], X [auth a]	Pvc4	-	-	-
AB [auth y], VA [auth t], WA [auth u], XA [auth v], YA [auth w], AB [auth y], VA [auth t], WA [auth u], XA [auth v], YA [auth w], ZA [auth x]	Pvc3	-	-	-
BB [auth z], QA [auth 1], RA [auth 2], SA [auth 3], TA [auth 4], BB [auth z], QA [auth 1], RA [auth 2], SA [auth 3], TA [auth 4], UA [auth 5]	Pvc1	structural molecule activity	-	-
KA [auth n], LA [auth o], MA [auth p], NA [auth q], OA [auth r], KA [auth n], LA [auth o], MA [auth p], NA [auth q], OA [auth r], PA [auth s]	Pvc5	structural molecule activity	-	-
EA [auth h], FA [auth i], GA [auth j], HA [auth k], IA [auth l], EA [auth h], FA [auth i], GA [auth j], HA [auth k], IA [auth l], JA [auth m]	Pvc2	-	-	-
AA [auth d], BA [auth e], CA [auth f], DA [auth g], Y [auth b], AA [auth d], BA [auth e], CA [auth f], DA [auth g], Y [auth b], Z [auth c]	Pvc7	-	-	-
M [auth P], N [auth Q], O [auth R], P [auth S], Q [auth T], M [auth P], N [auth Q], O [auth R], P [auth S], Q [auth T], R [auth U]	Pvc12	-	-	-
G [auth J], H [auth K], I [auth L], J [auth M], K [auth N], G [auth J], H [auth K], I [auth L], J [auth M], K [auth N], L [auth O]	Pvc11	-	-	-
A [auth D], B [auth E], C [auth F], D [auth G], E [auth H], A [auth D], B [auth E], C [auth F], D [auth G], E [auth H], F [auth I]	Pvc9	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
S [auth V], T [auth W], U [auth X], V [auth Y], W [auth Z], S [auth V], T [auth W], U [auth X], V [auth Y], W [auth Z], X [auth a]	IPR052042	Tail sheath structural protein	Family
S [auth V], T [auth W], U [auth X], V [auth Y], W [auth Z], S [auth V], T [auth W], U [auth X], V [auth Y], W [auth Z], X [auth a]	IPR020287	Tail sheath protein, C-terminal domain	Domain
AB [auth y], VA [auth t], WA [auth u], XA [auth v], YA [auth w], AB [auth y], VA [auth t], WA [auth u], XA [auth v], YA [auth w], ZA [auth x]	IPR052042	Tail sheath structural protein	Family
AB [auth y], VA [auth t], WA [auth u], XA [auth v], YA [auth w], AB [auth y], VA [auth t], WA [auth u], XA [auth v], YA [auth w], ZA [auth x]	IPR020287	Tail sheath protein, C-terminal domain	Domain
AB [auth y], VA [auth t], WA [auth u], XA [auth v], YA [auth w], AB [auth y], VA [auth t], WA [auth u], XA [auth v], YA [auth w], ZA [auth x]	IPR035089	Tail sheath protein, subtilisin-like domain	Domain
BB [auth z], QA [auth 1], RA [auth 2], SA [auth 3], TA [auth 4], BB [auth z], QA [auth 1], RA [auth 2], SA [auth 3], TA [auth 4], UA [auth 5]	IPR011747	Conserved hypothetical protein CHP02241	Family
BB [auth z], QA [auth 1], RA [auth 2], SA [auth 3], TA [auth 4], BB [auth z], QA [auth 1], RA [auth 2], SA [auth 3], TA [auth 4], UA [auth 5]	IPR010667	Bacteriophage T4, Gp19, tail tube	Family
KA [auth n], LA [auth o], MA [auth p], NA [auth q], OA [auth r], KA [auth n], LA [auth o], MA [auth p], NA [auth q], OA [auth r], PA [auth s]	IPR011747	Conserved hypothetical protein CHP02241	Family
KA [auth n], LA [auth o], MA [auth p], NA [auth q], OA [auth r], KA [auth n], LA [auth o], MA [auth p], NA [auth q], OA [auth r], PA [auth s]	IPR010667	Bacteriophage T4, Gp19, tail tube	Family
EA [auth h], FA [auth i], GA [auth j], HA [auth k], IA [auth l], EA [auth h], FA [auth i], GA [auth j], HA [auth k], IA [auth l], JA [auth m]	IPR052042	Tail sheath structural protein	Family
EA [auth h], FA [auth i], GA [auth j], HA [auth k], IA [auth l], EA [auth h], FA [auth i], GA [auth j], HA [auth k], IA [auth l], JA [auth m]	IPR020287	Tail sheath protein, C-terminal domain	Domain
EA [auth h], FA [auth i], GA [auth j], HA [auth k], IA [auth l], EA [auth h], FA [auth i], GA [auth j], HA [auth k], IA [auth l], JA [auth m]	IPR035089	Tail sheath protein, subtilisin-like domain	Domain
AA [auth d], BA [auth e], CA [auth f], DA [auth g], Y [auth b], AA [auth d], BA [auth e], CA [auth f], DA [auth g], Y [auth b], Z [auth c]	IPR045361	Contractile injection system tube protein, N-terminal domain	Domain
A [auth D], B [auth E], C [auth F], D [auth G], E [auth H], A [auth D], B [auth E], C [auth F], D [auth G], E [auth H], F [auth I]	IPR007048	IraD/Gp25-like	Domain