6IJE

Crystal structure of the type VI amidase immunity (Tai4) from Agrobacterium tumefaciens


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.174 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of the Agrobacterium tumefaciens type VI effector-immunity complex.

Fukuhara, S.Nakane, T.Yamashita, K.Ishii, R.Ishitani, R.Nureki, O.

(2018) Acta Crystallogr F Struct Biol Commun 74: 810-816


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Tai4
B, A
109Rhizobium radiobacterMutation(s): 0 
Find proteins for A0A083ZID3 (Rhizobium radiobacter)
Go to UniProtKB:  A0A083ZID3
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download SDF File 
Download CCD File 
A, B
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.174 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 53.921α = 90.00
b = 57.756β = 90.00
c = 71.465γ = 90.00
Software Package:
Software NamePurpose
Aimlessdata scaling
MOLREPphasing
DIALSdata reduction
REFMACrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-12-19
    Type: Initial release