Macromolecule Content

Total Structure Weight: 1745.24 kDa
Atom Count: 100274
Modelled Residue Count: 9759
Deposited Residue Count: 12300
Unique protein chains: 50
Unique nucleic acid chains: 2

6I9R

Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin

DOI: 10.2210/pdb6I9R/pdb
EMDataResource: EMD-4434

Classification: RIBOSOME
Organism(s): Homo sapiens
Mutation(s): No

Deposited: 2018-11-25 Released: 2020-07-08
Deposition Author(s): Modelska, A., Aibara, S., Amunts, A.
Funding Organization(s): Swedish Research Council

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.90 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

To Be Published

Modelska, A., Sighel, D., Notarangelo, M., Aibara, S., Re, A., Ricci, G., Guida, M., Soldano, A., Adami, V., Buccarelli, M., D'Alessandris, Q.G., Giannetti, S., Pacioni, S., Ricci-Vitiani, L., Rorbach, J., Pallini, R., Amunts, A., Mancini, I., Quattrone, A.

To be published.

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L32, mitochondrial	0	188	Homo sapiens	Mutation(s): 0 Gene Names: MRPL32, HSPC283
Find proteins for Q9BYC8 (Homo sapiens) Explore Q9BYC8 Go to UniProtKB: Q9BYC8
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PHAROS: Q9BYC8 GTEx: ENSG00000106591
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Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L33, mitochondrial	1	65	Homo sapiens	Mutation(s): 0 Gene Names: MRPL33, C2orf1
Find proteins for O75394 (Homo sapiens) Explore O75394 Go to UniProtKB: O75394
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PHAROS: O75394 GTEx: ENSG00000243147
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Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L34, mitochondrial	2	92	Homo sapiens	Mutation(s): 0 Gene Names: MRPL34
Find proteins for Q9BQ48 (Homo sapiens) Explore Q9BQ48 Go to UniProtKB: Q9BQ48
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PHAROS: Q9BQ48 GTEx: ENSG00000130312
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Entity ID: 4
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L35, mitochondrial	3	188	Homo sapiens	Mutation(s): 0 Gene Names: MRPL35, BM-007
Find proteins for Q9NZE8 (Homo sapiens) Explore Q9NZE8 Go to UniProtKB: Q9NZE8
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PHAROS: Q9NZE8 GTEx: ENSG00000132313
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Entity ID: 5
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L36, mitochondrial	4	103	Homo sapiens	Mutation(s): 0 Gene Names: MRPL36, BRIP1
Find proteins for Q9P0J6 (Homo sapiens) Explore Q9P0J6 Go to UniProtKB: Q9P0J6
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PHAROS: Q9P0J6 GTEx: ENSG00000171421
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Entity ID: 6
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L37, mitochondrial	5	423	Homo sapiens	Mutation(s): 0 Gene Names: MRPL37, MRPL2, RPML2, HSPC235
Find proteins for Q9BZE1 (Homo sapiens) Explore Q9BZE1 Go to UniProtKB: Q9BZE1
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PHAROS: Q9BZE1 GTEx: ENSG00000116221
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Entity ID: 7
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L38, mitochondrial	6	380	Homo sapiens	Mutation(s): 0 Gene Names: MRPL38, HSPC262
Find proteins for Q96DV4 (Homo sapiens) Explore Q96DV4 Go to UniProtKB: Q96DV4
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PHAROS: Q96DV4 GTEx: ENSG00000204316
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Entity ID: 8
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L39, mitochondrial	7	338	Homo sapiens	Mutation(s): 0 Gene Names: MRPL39, C21orf92, MRPL5, RPML5, MSTP003, PRED22
Find proteins for Q9NYK5 (Homo sapiens) Explore Q9NYK5 Go to UniProtKB: Q9NYK5
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PHAROS: Q9NYK5 GTEx: ENSG00000154719
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Entity ID: 9
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L40, mitochondrial	8	206	Homo sapiens	Mutation(s): 0 Gene Names: MRPL40, NLVCF, URIM
Find proteins for Q9NQ50 (Homo sapiens) Explore Q9NQ50 Go to UniProtKB: Q9NQ50
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PHAROS: Q9NQ50 GTEx: ENSG00000185608
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Entity ID: 10
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L41, mitochondrial	9	137	Homo sapiens	Mutation(s): 0 Gene Names: MRPL41, BMRP, MRPL27, RPML27, PIG3
Find proteins for Q8IXM3 (Homo sapiens) Explore Q8IXM3 Go to UniProtKB: Q8IXM3
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PHAROS: Q8IXM3 GTEx: ENSG00000182154
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Entity ID: 13
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L2, mitochondrial	D	305	Homo sapiens	Mutation(s): 0 Gene Names: MRPL2, CGI-22
Find proteins for Q5T653 (Homo sapiens) Explore Q5T653 Go to UniProtKB: Q5T653
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PHAROS: Q5T653 GTEx: ENSG00000112651
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Entity ID: 14
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L3, mitochondrial	E	348	Homo sapiens	Mutation(s): 0 Gene Names: MRPL3, MRL3, RPML3
Find proteins for P09001 (Homo sapiens) Explore P09001 Go to UniProtKB: P09001
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PHAROS: P09001 GTEx: ENSG00000114686
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Entity ID: 15
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L4, mitochondrial	F	311	Homo sapiens	Mutation(s): 0 Gene Names: MRPL4, CDABP0091, CGI-28
Find proteins for Q9BYD3 (Homo sapiens) Explore Q9BYD3 Go to UniProtKB: Q9BYD3
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PHAROS: Q9BYD3 GTEx: ENSG00000105364
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Entity ID: 16
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L9, mitochondrial	H	267	Homo sapiens	Mutation(s): 0 Gene Names: MRPL9
Find proteins for Q9BYD2 (Homo sapiens) Explore Q9BYD2 Go to UniProtKB: Q9BYD2
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PHAROS: Q9BYD2 GTEx: ENSG00000143436
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Entity ID: 17
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L10, mitochondrial	I	261	Homo sapiens	Mutation(s): 0 Gene Names: MRPL10, MRPL8, RPML8
Find proteins for Q7Z7H8 (Homo sapiens) Explore Q7Z7H8 Go to UniProtKB: Q7Z7H8
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PHAROS: Q7Z7H8 GTEx: ENSG00000159111
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Entity ID: 18
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L11, mitochondrial	J	192	Homo sapiens	Mutation(s): 0 Gene Names: MRPL11, CGI-113
Find proteins for Q9Y3B7 (Homo sapiens) Explore Q9Y3B7 Go to UniProtKB: Q9Y3B7
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PHAROS: Q9Y3B7 GTEx: ENSG00000174547
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Entity ID: 19
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L13, mitochondrial	K	178	Homo sapiens	Mutation(s): 0 Gene Names: MRPL13
Find proteins for Q9BYD1 (Homo sapiens) Explore Q9BYD1 Go to UniProtKB: Q9BYD1
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PHAROS: Q9BYD1 GTEx: ENSG00000172172
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Entity ID: 20
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L14, mitochondrial	L	145	Homo sapiens	Mutation(s): 0 Gene Names: MRPL14, MRPL32, RPML32
Find proteins for Q6P1L8 (Homo sapiens) Explore Q6P1L8 Go to UniProtKB: Q6P1L8
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PHAROS: Q6P1L8 GTEx: ENSG00000180992
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Entity ID: 21
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L15, mitochondrial	M	296	Homo sapiens	Mutation(s): 0 Gene Names: MRPL15, HSPC145
Find proteins for Q9P015 (Homo sapiens) Explore Q9P015 Go to UniProtKB: Q9P015
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PHAROS: Q9P015 GTEx: ENSG00000137547
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Entity ID: 22
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L16, mitochondrial	N	251	Homo sapiens	Mutation(s): 0 Gene Names: MRPL16, PNAS-111
Find proteins for Q9NX20 (Homo sapiens) Explore Q9NX20 Go to UniProtKB: Q9NX20
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PHAROS: Q9NX20 GTEx: ENSG00000166902
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Entity ID: 23
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L17, mitochondrial	O	175	Homo sapiens	Mutation(s): 0 Gene Names: MRPL17, LIP2
Find proteins for Q9NRX2 (Homo sapiens) Explore Q9NRX2 Go to UniProtKB: Q9NRX2
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PHAROS: Q9NRX2 GTEx: ENSG00000158042
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Entity ID: 24
Molecule	Chains	Sequence Length	Organism	Details	Image
Mitochondrial ribosomal protein L18, isoform CRA_b	P	179	Homo sapiens	Mutation(s): 0 Gene Names: MRPL18, hCG_34030
Find proteins for A8K9D2 (Homo sapiens) Explore A8K9D2 Go to UniProtKB: A8K9D2
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Entity ID: 25
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L19, mitochondrial	Q	292	Homo sapiens	Mutation(s): 0 Gene Names: MRPL19, KIAA0104, MRPL15
Find proteins for P49406 (Homo sapiens) Explore P49406 Go to UniProtKB: P49406
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PHAROS: P49406 GTEx: ENSG00000115364
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Entity ID: 26
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L20, mitochondrial	R	149	Homo sapiens	Mutation(s): 0 Gene Names: MRPL20
Find proteins for Q9BYC9 (Homo sapiens) Explore Q9BYC9 Go to UniProtKB: Q9BYC9
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PHAROS: Q9BYC9 GTEx: ENSG00000242485
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Entity ID: 27
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L21, mitochondrial	S	205	Homo sapiens	Mutation(s): 0 Gene Names: MRPL21
Find proteins for Q7Z2W9 (Homo sapiens) Explore Q7Z2W9 Go to UniProtKB: Q7Z2W9
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GTEx: ENSG00000197345
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Entity ID: 28
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L22, mitochondrial	T	212	Homo sapiens	Mutation(s): 0 Gene Names: MRPL22
Find proteins for E7ESL0 (Homo sapiens) Explore E7ESL0 Go to UniProtKB: E7ESL0
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GTEx: ENSG00000082515
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Entity ID: 29
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L23, mitochondrial	U	153	Homo sapiens	Mutation(s): 0 Gene Names: MRPL23, L23MRP, RPL23L
Find proteins for Q16540 (Homo sapiens) Explore Q16540 Go to UniProtKB: Q16540
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PHAROS: Q16540 GTEx: ENSG00000214026
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Entity ID: 30
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L24, mitochondrial	V	216	Homo sapiens	Mutation(s): 0 Gene Names: MRPL24
Find proteins for Q96A35 (Homo sapiens) Explore Q96A35 Go to UniProtKB: Q96A35
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PHAROS: Q96A35 GTEx: ENSG00000143314
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Entity ID: 31
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L27, mitochondrial	W	148	Homo sapiens	Mutation(s): 0 Gene Names: MRPL27, HSPC250
Find proteins for Q9P0M9 (Homo sapiens) Explore Q9P0M9 Go to UniProtKB: Q9P0M9
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PHAROS: Q9P0M9 GTEx: ENSG00000108826
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Entity ID: 32
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L28, mitochondrial	X	256	Homo sapiens	Mutation(s): 0 Gene Names: MRPL28, MAAT1
Find proteins for Q13084 (Homo sapiens) Explore Q13084 Go to UniProtKB: Q13084
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PHAROS: Q13084 GTEx: ENSG00000086504
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Entity ID: 33
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L47, mitochondrial	Y	250	Homo sapiens	Mutation(s): 0 Gene Names: MRPL47, NCM1, CGI-204
Find proteins for Q9HD33 (Homo sapiens) Explore Q9HD33 Go to UniProtKB: Q9HD33
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PHAROS: Q9HD33 GTEx: ENSG00000136522
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Entity ID: 34
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L30, mitochondrial	Z	161	Homo sapiens	Mutation(s): 0 Gene Names: MRPL30, MRPL28, RPML28, HSPC249
Find proteins for Q8TCC3 (Homo sapiens) Explore Q8TCC3 Go to UniProtKB: Q8TCC3
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PHAROS: Q8TCC3 GTEx: ENSG00000185414
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Entity ID: 35
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L42, mitochondrial	a	142	Homo sapiens	Mutation(s): 0 Gene Names: MRPL42, MRPL31, MRPS32, RPML31, HSPC204, PTD007
Find proteins for Q9Y6G3 (Homo sapiens) Explore Q9Y6G3 Go to UniProtKB: Q9Y6G3
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PHAROS: Q9Y6G3 GTEx: ENSG00000198015
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Entity ID: 36
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L43, mitochondrial	b	215	Homo sapiens	Mutation(s): 0 Gene Names: MRPL43
Find proteins for Q8N983 (Homo sapiens) Explore Q8N983 Go to UniProtKB: Q8N983
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PHAROS: Q8N983 GTEx: ENSG00000055950
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Entity ID: 37
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L44, mitochondrial	c	332	Homo sapiens	Mutation(s): 0 Gene Names: MRPL44 EC: 3.1.26
Find proteins for Q9H9J2 (Homo sapiens) Explore Q9H9J2 Go to UniProtKB: Q9H9J2
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PHAROS: Q9H9J2 GTEx: ENSG00000135900
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Entity ID: 38
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L45, mitochondrial	d	306	Homo sapiens	Mutation(s): 0 Gene Names: MRPL45
Find proteins for Q9BRJ2 (Homo sapiens) Explore Q9BRJ2 Go to UniProtKB: Q9BRJ2
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PHAROS: Q9BRJ2
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Entity ID: 39
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L46, mitochondrial	e	279	Homo sapiens	Mutation(s): 0 Gene Names: MRPL46, C15orf4, LIECG2
Find proteins for Q9H2W6 (Homo sapiens) Explore Q9H2W6 Go to UniProtKB: Q9H2W6
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GTEx: ENSG00000259494
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Entity ID: 40
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L48, mitochondrial	f	212	Homo sapiens	Mutation(s): 0 Gene Names: MRPL48, CGI-118, HSPC290
Find proteins for Q96GC5 (Homo sapiens) Explore Q96GC5 Go to UniProtKB: Q96GC5
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PHAROS: Q96GC5 GTEx: ENSG00000175581
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Entity ID: 41
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L49, mitochondrial	g	166	Homo sapiens	Mutation(s): 0 Gene Names: MRPL49, C11orf4, NOF1, OK/SW-cl.67
Find proteins for Q13405 (Homo sapiens) Explore Q13405 Go to UniProtKB: Q13405
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PHAROS: Q13405 GTEx: ENSG00000149792
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Entity ID: 42
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L50, mitochondrial	h	158	Homo sapiens	Mutation(s): 0 Gene Names: MRPL50
Find proteins for Q8N5N7 (Homo sapiens) Explore Q8N5N7 Go to UniProtKB: Q8N5N7
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PHAROS: Q8N5N7 GTEx: ENSG00000136897
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Entity ID: 43
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L51, mitochondrial	i	128	Homo sapiens	Mutation(s): 0 Gene Names: MRPL51, MRP64, CDA09, HSPC241
Find proteins for Q4U2R6 (Homo sapiens) Explore Q4U2R6 Go to UniProtKB: Q4U2R6
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PHAROS: Q4U2R6 GTEx: ENSG00000111639
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Entity ID: 44
Molecule	Chains	Sequence Length	Organism	Details	Image
cDNA FLJ76418, highly similar to Homo sapiens mitochondrial ribosomal protein L52 (MRPL52), transcript variant 1, mRNA	j	123	Homo sapiens	Mutation(s): 0
Find proteins for A8K7J6 (Homo sapiens) Explore A8K7J6 Go to UniProtKB: A8K7J6
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Entity ID: 45
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L53, mitochondrial	k	112	Homo sapiens	Mutation(s): 0 Gene Names: MRPL53
Find proteins for Q96EL3 (Homo sapiens) Explore Q96EL3 Go to UniProtKB: Q96EL3
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PHAROS: Q96EL3 GTEx: ENSG00000204822
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Entity ID: 46
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L54, mitochondrial	l	138	Homo sapiens	Mutation(s): 0 Gene Names: MRPL54
Find proteins for Q6P161 (Homo sapiens) Explore Q6P161 Go to UniProtKB: Q6P161
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PHAROS: Q6P161 GTEx: ENSG00000183617
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Entity ID: 47
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein L55, mitochondrial	m	128	Homo sapiens	Mutation(s): 0 Gene Names: MRPL55, UNQ5835/PRO19675
Find proteins for Q7Z7F7 (Homo sapiens) Explore Q7Z7F7 Go to UniProtKB: Q7Z7F7
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PHAROS: Q7Z7F7 GTEx: ENSG00000162910
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Entity ID: 48
Molecule	Chains	Sequence Length	Organism	Details	Image
Ribosomal protein 63, mitochondrial	o	102	Homo sapiens	Mutation(s): 0 Gene Names: MRPL57, MRP63
Find proteins for Q9BQC6 (Homo sapiens) Explore Q9BQC6 Go to UniProtKB: Q9BQC6
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PHAROS: Q9BQC6 GTEx: ENSG00000173141
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Entity ID: 49
Molecule	Chains	Sequence Length	Organism	Details	Image
Peptidyl-tRNA hydrolase ICT1, mitochondrial	p	206	Homo sapiens	Mutation(s): 0 Gene Names: MRPL58, DS1, ICT1 EC: 3.1.1.29
Find proteins for Q14197 (Homo sapiens) Explore Q14197 Go to UniProtKB: Q14197
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PHAROS: Q14197 GTEx: ENSG00000167862
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Entity ID: 50
Molecule	Chains	Sequence Length	Organism	Details	Image
Growth arrest and DNA damage-inducible proteins-interacting protein 1	q	222	Homo sapiens	Mutation(s): 0 Gene Names: GADD45GIP1, MRPL59, PLINP1, PRG6
Find proteins for Q8TAE8 (Homo sapiens) Explore Q8TAE8 Go to UniProtKB: Q8TAE8
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PHAROS: Q8TAE8 GTEx: ENSG00000179271
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Entity ID: 51
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein S18a, mitochondrial	r	196	Homo sapiens	Mutation(s): 0 Gene Names: MRPS18A
Find proteins for Q9NVS2 (Homo sapiens) Explore Q9NVS2 Go to UniProtKB: Q9NVS2
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PHAROS: Q9NVS2 GTEx: ENSG00000096080
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Entity ID: 52
Molecule	Chains	Sequence Length	Organism	Details	Image
39S ribosomal protein S30, mitochondrial	s	439	Homo sapiens	Mutation(s): 0 Gene Names: MRPS30, PDCD9, BM-047
Find proteins for Q9NP92 (Homo sapiens) Explore Q9NP92 Go to UniProtKB: Q9NP92
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PHAROS: Q9NP92 GTEx: ENSG00000112996
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Entity ID: 11
Molecule	Chains	Length	Organism	Image
16S rRNA	A	1557	Homo sapiens

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Entity ID: 12
Molecule	Chains	Length	Organism	Image
tRNA Val	B	69	Homo sapiens

Small Molecules

Ligands 5 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
H8Q Query on H8Q Download Ideal Coordinates CCD File SDF format, chain CG [A] MOL2 format, chain CG [A]	A	~{N}-[(3~{S},6~{R},12~{R},15~{S},16~{S},19~{S},22~{S},25~{S})-25-[[(3~{S})-1-azabicyclo[2.2.2]octan-3-yl]sulfanylmethyl]-3-[[4-(dimethylamino)phenyl]methyl]-12-ethyl-4,16-dimethyl-2,5,11,14,18,21,24-heptakis(oxidanylidene)-19-phenyl-17-oxa-1,4,10,13,20-pentazatricyclo[20.4.0.0^{6,10}]hexacosan-15-yl]-3-oxidanyl-pyridine-2-carboxamide C₅₃ H₆₇ N₉ O₁₀ S WTHRRGMBUAHGNI-QGNGWGIWSA-N		Ligand Interaction
H8T Query on H8T Download Ideal Coordinates CCD File SDF format, chain DG [A] MOL2 format, chain DG [A]	A	(10~{R},11~{R},12~{E},17~{E},19~{E},21~{S})-11,19-dimethyl-21-oxidanyl-10-propan-2-yl-9,26-dioxa-3,15,28-triazatricyclo[23.2.1.0^{3,7}]octacosa-1(27),4,6,12,17,19,25(28)-heptaene-2,8,14,23-tetrone C₂₈ H₃₃ N₃ O₇ CNTGCXRBDCXZRN-FQTGFAPKSA-N		Ligand Interaction
G Query on G Download Ideal Coordinates CCD File SDF format, chain BG [A] MOL2 format, chain BG [A]	A	GUANOSINE-5'-MONOPHOSPHATE C₁₀ H₁₄ N₅ O₈ P RQFCJASXJCIDSX-UUOKFMHZSA-N		Ligand Interaction
ZN Query on ZN Download Ideal Coordinates CCD File SDF format, chain AB [0] SDF format, chain BB [4] SDF format, chain FG [I] MOL2 format, chain AB [0] MOL2 format, chain BB [4] MOL2 format, chain FG [I]	0, 4, I	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Ligand Interaction
MG Query on MG Download Ideal Coordinates CCD File SDF format, chain AC [A] SDF format, chain AD [A] SDF format, chain AE [A] SDF format, chain AF [A] SDF format, chain AG [A] SDF format, chain BC [A] SDF format, chain BD [A] SDF format, chain BE [A] SDF format, chain BF [A] SDF format, chain CB [9] SDF format, chain CC [A] SDF format, chain CD [A] SDF format, chain CE [A] SDF format, chain CF [A] SDF format, chain DB [A] SDF format, chain DC [A] SDF format, chain DD [A] SDF format, chain DE [A] SDF format, chain DF [A] SDF format, chain EB [A] SDF format, chain EC [A] SDF format, chain ED [A] SDF format, chain EE [A] SDF format, chain EF [A] SDF format, chain EG [D] SDF format, chain FB [A] SDF format, chain FC [A] SDF format, chain FD [A] SDF format, chain FE [A] SDF format, chain FF [A] SDF format, chain GB [A] SDF format, chain GC [A] SDF format, chain GD [A] SDF format, chain GE [A] SDF format, chain GF [A] SDF format, chain GG [L] SDF format, chain HB [A] SDF format, chain HC [A] SDF format, chain HD [A] SDF format, chain HE [A] SDF format, chain HF [A] SDF format, chain HG [M] SDF format, chain IB [A] SDF format, chain IC [A] SDF format, chain ID [A] SDF format, chain IE [A] SDF format, chain IF [A] SDF format, chain IG [g] SDF format, chain JB [A] SDF format, chain JC [A] SDF format, chain JD [A] SDF format, chain JE [A] SDF format, chain JF [A] SDF format, chain JG [o] SDF format, chain KB [A] SDF format, chain KC [A] SDF format, chain KD [A] SDF format, chain KE [A] SDF format, chain KF [A] SDF format, chain LB [A] SDF format, chain LC [A] SDF format, chain LD [A] SDF format, chain LE [A] SDF format, chain LF [A] SDF format, chain MB [A] SDF format, chain MC [A] SDF format, chain MD [A] SDF format, chain ME [A] SDF format, chain MF [A] SDF format, chain NB [A] SDF format, chain NC [A] SDF format, chain ND [A] SDF format, chain NE [A] SDF format, chain NF [A] SDF format, chain OB [A] SDF format, chain OC [A] SDF format, chain OD [A] SDF format, chain OE [A] SDF format, chain OF [A] SDF format, chain PB [A] SDF format, chain PC [A] SDF format, chain PD [A] SDF format, chain PE [A] SDF format, chain PF [A] SDF format, chain QB [A] SDF format, chain QC [A] SDF format, chain QD [A] SDF format, chain QE [A] SDF format, chain QF [A] SDF format, chain RB [A] SDF format, chain RC [A] SDF format, chain RD [A] SDF format, chain RE [A] SDF format, chain RF [A] SDF format, chain SB [A] SDF format, chain SC [A] SDF format, chain SD [A] SDF format, chain SE [A] SDF format, chain SF [A] SDF format, chain TB [A] SDF format, chain TC [A] SDF format, chain TD [A] SDF format, chain TE [A] SDF format, chain TF [A] SDF format, chain UB [A] SDF format, chain UC [A] SDF format, chain UD [A] SDF format, chain UE [A] SDF format, chain UF [A] SDF format, chain VB [A] SDF format, chain VC [A] SDF format, chain VD [A] SDF format, chain VE [A] SDF format, chain VF [A] SDF format, chain WB [A] SDF format, chain WC [A] SDF format, chain WD [A] SDF format, chain WE [A] SDF format, chain WF [A] SDF format, chain XB [A] SDF format, chain XC [A] SDF format, chain XD [A] SDF format, chain XE [A] SDF format, chain XF [A] SDF format, chain YB [A] SDF format, chain YC [A] SDF format, chain YD [A] SDF format, chain YE [A] SDF format, chain YF [A] SDF format, chain ZB [A] SDF format, chain ZC [A] SDF format, chain ZD [A] SDF format, chain ZE [A] SDF format, chain ZF [A] MOL2 format, chain AC [A] MOL2 format, chain AD [A] MOL2 format, chain AE [A] MOL2 format, chain AF [A] MOL2 format, chain AG [A] MOL2 format, chain BC [A] MOL2 format, chain BD [A] MOL2 format, chain BE [A] MOL2 format, chain BF [A] MOL2 format, chain CB [9] MOL2 format, chain CC [A] MOL2 format, chain CD [A] MOL2 format, chain CE [A] MOL2 format, chain CF [A] MOL2 format, chain DB [A] MOL2 format, chain DC [A] MOL2 format, chain DD [A] MOL2 format, chain DE [A] MOL2 format, chain DF [A] MOL2 format, chain EB [A] MOL2 format, chain EC [A] MOL2 format, chain ED [A] MOL2 format, chain EE [A] MOL2 format, chain EF [A] MOL2 format, chain EG [D] MOL2 format, chain FB [A] MOL2 format, chain FC [A] MOL2 format, chain FD [A] MOL2 format, chain FE [A] MOL2 format, chain FF [A] MOL2 format, chain GB [A] MOL2 format, chain GC [A] MOL2 format, chain GD [A] MOL2 format, chain GE [A] MOL2 format, chain GF [A] MOL2 format, chain GG [L] MOL2 format, chain HB [A] MOL2 format, chain HC [A] MOL2 format, chain HD [A] MOL2 format, chain HE [A] MOL2 format, chain HF [A] MOL2 format, chain HG [M] MOL2 format, chain IB [A] MOL2 format, chain IC [A] MOL2 format, chain ID [A] MOL2 format, chain IE [A] MOL2 format, chain IF [A] MOL2 format, chain IG [g] MOL2 format, chain JB [A] MOL2 format, chain JC [A] MOL2 format, chain JD [A] MOL2 format, chain JE [A] MOL2 format, chain JF [A] MOL2 format, chain JG [o] MOL2 format, chain KB [A] MOL2 format, chain KC [A] MOL2 format, chain KD [A] MOL2 format, chain KE [A] MOL2 format, chain KF [A] MOL2 format, chain LB [A] MOL2 format, chain LC [A] MOL2 format, chain LD [A] MOL2 format, chain LE [A] MOL2 format, chain LF [A] MOL2 format, chain MB [A] MOL2 format, chain MC [A] MOL2 format, chain MD [A] MOL2 format, chain ME [A] MOL2 format, chain MF [A] MOL2 format, chain NB [A] MOL2 format, chain NC [A] MOL2 format, chain ND [A] MOL2 format, chain NE [A] MOL2 format, chain NF [A] MOL2 format, chain OB [A] MOL2 format, chain OC [A] MOL2 format, chain OD [A] MOL2 format, chain OE [A] MOL2 format, chain OF [A] MOL2 format, chain PB [A] MOL2 format, chain PC [A] MOL2 format, chain PD [A] MOL2 format, chain PE [A] MOL2 format, chain PF [A] MOL2 format, chain QB [A] MOL2 format, chain QC [A] MOL2 format, chain QD [A] MOL2 format, chain QE [A] MOL2 format, chain QF [A] MOL2 format, chain RB [A] MOL2 format, chain RC [A] MOL2 format, chain RD [A] MOL2 format, chain RE [A] MOL2 format, chain RF [A] MOL2 format, chain SB [A] MOL2 format, chain SC [A] MOL2 format, chain SD [A] MOL2 format, chain SE [A] MOL2 format, chain SF [A] MOL2 format, chain TB [A] MOL2 format, chain TC [A] MOL2 format, chain TD [A] MOL2 format, chain TE [A] MOL2 format, chain TF [A] MOL2 format, chain UB [A] MOL2 format, chain UC [A] MOL2 format, chain UD [A] MOL2 format, chain UE [A] MOL2 format, chain UF [A] MOL2 format, chain VB [A] MOL2 format, chain VC [A] MOL2 format, chain VD [A] MOL2 format, chain VE [A] MOL2 format, chain VF [A] MOL2 format, chain WB [A] MOL2 format, chain WC [A] MOL2 format, chain WD [A] MOL2 format, chain WE [A] MOL2 format, chain WF [A] MOL2 format, chain XB [A] MOL2 format, chain XC [A] MOL2 format, chain XD [A] MOL2 format, chain XE [A] MOL2 format, chain XF [A] MOL2 format, chain YB [A] MOL2 format, chain YC [A] MOL2 format, chain YD [A] MOL2 format, chain YE [A] MOL2 format, chain YF [A] MOL2 format, chain ZB [A] MOL2 format, chain ZC [A] MOL2 format, chain ZD [A] MOL2 format, chain ZE [A] MOL2 format, chain ZF [A]	9, A, D, L, M, g, o	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.90 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Deposited Date: 2018-11-25
Released Date: 2020-07-08

Deposition Author(s):

Modelska, A.

Aibara, S.

Amunts, A.

Funding Organization	Location	Grant Number
Swedish Research Council	Sweden	NT_2015-04107

Revision History (Full details and data files)

Version 1.0: 2020-07-08
Type: Initial release
Version 1.1: 2020-07-15
Changes: Structure summary
Version 1.2: 2020-07-22
Changes: Database references

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Deposit Data

Deposition Help & Resources

176773 Biological Macromolecular Structures Enabling Breakthroughs in Research and Education

6I9R

Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin

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