6HU6

Structure of ARF1 RNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.904 Å
  • R-Value Free: 0.249 
  • R-Value Work: 0.226 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The crystal structure of Staufen1 in complex with a physiological RNA sheds light on substrate selectivity.

Lazzaretti, D.Bandholz-Cajamarca, L.Emmerich, C.Schaaf, K.Basquin, C.Irion, U.Bono, F.

(2018) Life Sci Alliance 1: e201800187-e201800187


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsLengthOrganism
RNA (19-MER)A19Homo sapiens
Entity ID: 2
MoleculeChainsLengthOrganism
RNA (19-MER)E19Homo sapiens
Entity ID: 3
MoleculeChainsLengthOrganism
RNA (5'-R(*GP*AP*GP*UP*GP*CP*CP*AP*GP*A)-3')B10Homo sapiens
Entity ID: 4
MoleculeChainsLengthOrganism
RNA (5'-R(*CP*UP*GP*GP*UP*AP*CP*UP*C)-3')F9Homo sapiens
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NH4
Query on NH4

Download SDF File 
Download CCD File 
A, B
AMMONIUM ION
H4 N
QGZKDVFQNNGYKY-UHFFFAOYSA-O
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.904 Å
  • R-Value Free: 0.249 
  • R-Value Work: 0.226 
  • Space Group: H 3 2
Unit Cell:
Length (Å)Angle (°)
a = 43.803α = 90.00
b = 43.803β = 90.00
c = 452.087γ = 120.00
Software Package:
Software NamePurpose
XDSdata scaling
PHENIXrefinement
PHASERphasing
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
European Research CouncilGermany310957
German Research FoundationGermanyBO3588/2-1

Revision History 

  • Version 1.0: 2018-11-21
    Type: Initial release
  • Version 1.1: 2018-11-28
    Type: Data collection, Database references