6HP3

ARBITRIUM PEPTIDE RECEPTOR FROM SPBETA PHAGE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.250 
  • R-Value Work: 0.219 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Deciphering the Molecular Mechanism Underpinning Phage Arbitrium Communication Systems.

Gallego Del Sol, F.Penades, J.R.Marina, A.

(2019) Mol.Cell 74: 59-72.e3


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
SPBc2 prophage-derived uncharacterized protein YopK
A, B, C, D, E, F, G, H
386Bacillus subtilis (strain 168)Mutation(s): 0 
Gene Names: yopK
Find proteins for O31927 (Bacillus subtilis (strain 168))
Go to UniProtKB:  O31927
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D, E, F, G, H
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.250 
  • R-Value Work: 0.219 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 78.907α = 90.00
b = 251.202β = 90.89
c = 95.077γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
SCALAdata scaling
XDSdata reduction
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-02-13
    Type: Initial release
  • Version 1.1: 2019-02-20
    Type: Data collection, Database references
  • Version 1.2: 2019-04-17
    Type: Data collection, Database references