6HH2

Rab29 small GTPase bound to GDP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.449 Å
  • R-Value Free: 0.184 
  • R-Value Work: 0.165 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of Rab29(GDP) at 1.45 Angstroms resolution

Waschbusch, D.McGrath, E.Khan, A.R.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ras-related protein Rab-7L1
A
180Homo sapiensMutation(s): 4 
Gene Names: RAB29 (RAB7L1)
Find proteins for O14966 (Homo sapiens)
Go to Gene View: RAB29
Go to UniProtKB:  O14966
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GDP
Query on GDP

Download SDF File 
Download CCD File 
A
GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
 Ligand Interaction
MG
Query on MG

Download SDF File 
Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.449 Å
  • R-Value Free: 0.184 
  • R-Value Work: 0.165 
  • Space Group: P 31 2 1
Unit Cell:
Length (Å)Angle (°)
a = 71.960α = 90.00
b = 71.960β = 90.00
c = 86.348γ = 120.00
Software Package:
Software NamePurpose
Aimlessdata scaling
PHASERphasing
PHENIXrefinement
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Science Foundation IrelandIreland12/1A/1239

Revision History 

  • Version 1.0: 2019-09-11
    Type: Initial release