6GW3

Structure of TKS from Cannabis sativa in complex with CoA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.39 Å
  • R-Value Free: 0.155 
  • R-Value Work: 0.118 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of a PKS class III from Cannabis sativa

Kearsey, L.Karuppiah, V.Leys, D.Takano, E.Scrutton, N.S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
3,5,7-trioxododecanoyl-CoA synthase
A, B, C
388Cannabis sativaMutation(s): 0 
Gene Names: OLS (CAN24, PKS-1, TKS)
EC: 2.3.1.206
Find proteins for B1Q2B6 (Cannabis sativa)
Go to UniProtKB:  B1Q2B6
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
3,5,7-trioxododecanoyl-CoA synthase,3,5,7-trioxododecanoyl-CoA synthase
D
489Cannabis sativaMutation(s): 0 
Gene Names: OLS (CAN24, PKS-1, TKS)
EC: 2.3.1.206
Find proteins for B1Q2B6 (Cannabis sativa)
Go to UniProtKB:  B1Q2B6
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
COA
Query on COA

Download SDF File 
Download CCD File 
A, B, C, D
COENZYME A
C21 H36 N7 O16 P3 S
RGJOEKWQDUBAIZ-IBOSZNHHSA-N
 Ligand Interaction
PEG
Query on PEG

Download SDF File 
Download CCD File 
A, B
DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
CSD
Query on CSD
A, B, C, D
L-PEPTIDE LINKINGC3 H7 N O4 SCYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.39 Å
  • R-Value Free: 0.155 
  • R-Value Work: 0.118 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 71.560α = 90.00
b = 123.288β = 109.55
c = 87.939γ = 90.00
Software Package:
Software NamePurpose
XDSdata reduction
REFMACrefinement
PHASERphasing
XDSdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-10-09
    Type: Initial release