6GR8

Human AURKC INCENP complex bound to BRD-7880


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.176 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

AURKC INCENP complex bound to BRD-7880

Abdul Azeez, K.R.Elkins, J.M.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Aurora kinase C
A
274Homo sapiensMutation(s): 0 
Gene Names: AURKC (AIE2, AIK3, AIRK3, ARK3, STK13)
EC: 2.7.11.1
Find proteins for Q9UQB9 (Homo sapiens)
Go to Gene View: AURKC
Go to UniProtKB:  Q9UQB9
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Inner centromere protein
B
70Homo sapiensMutation(s): 0 
Gene Names: INCENP
Find proteins for Q9NQS7 (Homo sapiens)
Go to Gene View: INCENP
Go to UniProtKB:  Q9NQS7
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
F8Z
Query on F8Z

Download SDF File 
Download CCD File 
A
1-[(2~{R},3~{S})-2-[[1,3-benzodioxol-5-ylmethyl(methyl)amino]methyl]-3-methyl-6-oxidanylidene-5-[(2~{S})-1-oxidanylpropan-2-yl]-3,4-dihydro-2~{H}-1,5-benzoxazocin-8-yl]-3-(4-methoxyphenyl)urea
C32 H38 N4 O7
NGRSXEMLDRQNMH-LPBFERMMSA-N
 Ligand Interaction
Modified Residues  2 Unique
IDChainsTypeFormula2D DiagramParent
SEP
Query on SEP
B
L-PEPTIDE LINKINGC3 H8 N O6 PSER
TPO
Query on TPO
A
L-PEPTIDE LINKINGC4 H10 N O6 PTHR
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.176 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 56.650α = 90.00
b = 72.480β = 90.00
c = 83.060γ = 90.00
Software Package:
Software NamePurpose
MOSFLMdata reduction
REFMACrefinement
PHASERphasing
Aimlessdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-05-15
    Type: Initial release