6GN2

Racemic crystal structure of A-DNA duplex formed from d(CCCGGG) in space group R3


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.48 Å
  • R-Value Free: 0.272 
  • R-Value Work: 0.259 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Racemic crystal structures of A-DNA duplexes

Mandal, P.K.Collie, G.W.Kauffmann, B.Huc, I.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsLengthOrganism
DNA (5'-D(*CP*CP*CP*GP*GP*G)-3')A,B,C,D6synthetic construct
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
TMO
Query on TMO

Download SDF File 
Download CCD File 
B
trimethylamine oxide
C3 H9 N O
UYPYRKYUKCHHIB-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.48 Å
  • R-Value Free: 0.272 
  • R-Value Work: 0.259 
  • Space Group: H -3
Unit Cell:
Length (Å)Angle (°)
a = 105.413α = 90.00
b = 105.413β = 90.00
c = 56.131γ = 120.00
Software Package:
Software NamePurpose
PHASERphasing
XDSdata reduction
XDSdata scaling
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
European Research CouncilFranceERC-2012-AdG-320892

Revision History 

  • Version 1.0: 2019-09-11
    Type: Initial release